Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXD3Q8N9H8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 AC011767.1-201ENST00000617410 1153 ntBASIC20.48■□□□□ 0.87
EXD3Q8N9H8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.48■□□□□ 0.87
EXD3Q8N9H8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 AC142086.2-201ENST00000569753 217 ntBASIC20.47■□□□□ 0.87
EXD3Q8N9H8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EXD3Q8N9H8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 DUX4L4-201ENST00000566884 1269 ntBASIC20.46■□□□□ 0.87
EXD3Q8N9H8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.46■□□□□ 0.87
EXD3Q8N9H8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
EXD3Q8N9H8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 ALDH1A3-203ENST00000557963 1670 ntBASIC20.45■□□□□ 0.86
EXD3Q8N9H8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.45■□□□□ 0.86
EXD3Q8N9H8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 KRT19P1-201ENST00000405746 1186 ntBASIC20.44■□□□□ 0.86
EXD3Q8N9H8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 KRT18P6-201ENST00000555540 1265 ntBASIC20.44■□□□□ 0.86
EXD3Q8N9H8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.44■□□□□ 0.86
EXD3Q8N9H8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.43■□□□□ 0.86
EXD3Q8N9H8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
EXD3Q8N9H8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXD3Q8N9H8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXD3Q8N9H8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.43■□□□□ 0.86
EXD3Q8N9H8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EXD3Q8N9H8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.43■□□□□ 0.86
EXD3Q8N9H8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms