Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 AL158211.5-201ENST00000623583 2518 ntBASIC16.35■□□□□ 0.21
HIST3H2BBQ8N257 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 PCDHAC2-203ENST00000615316 3011 ntBASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST3H2BBQ8N257 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST3H2BBQ8N257 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HIST3H2BBQ8N257 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HIST3H2BBQ8N257 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 ALDH1A3-203ENST00000557963 1670 ntBASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST3H2BBQ8N257 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIST3H2BBQ8N257 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 AC005082.1-201ENST00000413042 2259 ntBASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST3H2BBQ8N257 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 AC087742.1-201ENST00000575880 1738 ntBASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 AL359504.2-201ENST00000605506 1601 ntBASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST3H2BBQ8N257 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.29■□□□□ 0.2
HIST3H2BBQ8N257 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST3H2BBQ8N257 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HIST3H2BBQ8N257 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.28■□□□□ 0.2
HIST3H2BBQ8N257 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIST3H2BBQ8N257 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIST3H2BBQ8N257 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms