Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.65■■□□□ 1.06
CRLF3Q8IUI8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CRLF3Q8IUI8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRLF3Q8IUI8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CRLF3Q8IUI8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CRLF3Q8IUI8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CRLF3Q8IUI8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CRLF3Q8IUI8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CRLF3Q8IUI8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRLF3Q8IUI8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.64■■□□□ 1.05
CRLF3Q8IUI8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.64■■□□□ 1.05
CRLF3Q8IUI8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.64■■□□□ 1.05
CRLF3Q8IUI8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRLF3Q8IUI8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.64■■□□□ 1.05
CRLF3Q8IUI8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CRLF3Q8IUI8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CRLF3Q8IUI8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CRLF3Q8IUI8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRLF3Q8IUI8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CRLF3Q8IUI8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRLF3Q8IUI8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRLF3Q8IUI8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CRLF3Q8IUI8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CRLF3Q8IUI8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CRLF3Q8IUI8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.58■■□□□ 1.04
CRLF3Q8IUI8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRLF3Q8IUI8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CRLF3Q8IUI8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.57■■□□□ 1.04
CRLF3Q8IUI8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms