Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC131274.2-201ENST00000580697 1507 ntBASIC19.27■□□□□ 0.68
LRRC28Q86X40 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC28Q86X40 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC28Q86X40 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC28Q86X40 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC28Q86X40 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC28Q86X40 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LRRC28Q86X40 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC28Q86X40 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC28Q86X40 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC28Q86X40 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC28Q86X40 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC28Q86X40 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC28Q86X40 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC28Q86X40 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC28Q86X40 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC28Q86X40 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
LRRC28Q86X40 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC28Q86X40 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC28Q86X40 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 AL356740.2-201ENST00000601559 647 ntBASIC19.25■□□□□ 0.67
LRRC28Q86X40 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC28Q86X40 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRRC28Q86X40 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC28Q86X40 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LRRC28Q86X40 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC28Q86X40 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRRC28Q86X40 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC28Q86X40 MIR3621-201ENST00000580529 85 ntBASIC19.24■□□□□ 0.67
LRRC28Q86X40 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC28Q86X40 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC28Q86X40 AL117332.1-201ENST00000622628 974 ntBASIC19.24■□□□□ 0.67
LRRC28Q86X40 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LRRC28Q86X40 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC28Q86X40 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC28Q86X40 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC28Q86X40 AC010542.4-201ENST00000563151 1910 ntBASIC19.23■□□□□ 0.67
LRRC28Q86X40 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC28Q86X40 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 AC087742.1-201ENST00000575880 1738 ntBASIC19.23■□□□□ 0.67
LRRC28Q86X40 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRRC28Q86X40 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.23■□□□□ 0.67
LRRC28Q86X40 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC28Q86X40 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC28Q86X40 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LRRC28Q86X40 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC28Q86X40 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC28Q86X40 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC28Q86X40 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.22■□□□□ 0.67
LRRC28Q86X40 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC28Q86X40 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC28Q86X40 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC28Q86X40 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC28Q86X40 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC28Q86X40 AL353803.4-201ENST00000565882 1934 ntBASIC19.21■□□□□ 0.67
LRRC28Q86X40 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC28Q86X40 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC28Q86X40 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC28Q86X40 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms