Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.26■■□□□ 1.15
C12orf40Q86WS4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 ID1-201ENST00000376105 1233 ntBASIC22.25■■□□□ 1.15
C12orf40Q86WS4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
C12orf40Q86WS4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
C12orf40Q86WS4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C12orf40Q86WS4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C12orf40Q86WS4 CDCA4P2-201ENST00000441182 718 ntBASIC22.24■■□□□ 1.15
C12orf40Q86WS4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C12orf40Q86WS4 RAP2CP1-201ENST00000605103 478 ntBASIC22.24■■□□□ 1.15
C12orf40Q86WS4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.24■■□□□ 1.15
C12orf40Q86WS4 AC073111.5-205ENST00000641717 521 ntBASIC22.24■■□□□ 1.15
C12orf40Q86WS4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C12orf40Q86WS4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.23■■□□□ 1.15
C12orf40Q86WS4 AC079140.4-201ENST00000507448 529 ntBASIC22.23■■□□□ 1.15
C12orf40Q86WS4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.23■■□□□ 1.15
C12orf40Q86WS4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
C12orf40Q86WS4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.23■■□□□ 1.15
C12orf40Q86WS4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C12orf40Q86WS4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
C12orf40Q86WS4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
C12orf40Q86WS4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 AC005224.4-201ENST00000583262 1652 ntBASIC22.21■■□□□ 1.15
C12orf40Q86WS4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 KRT19P1-201ENST00000405746 1186 ntBASIC22.21■■□□□ 1.15
C12orf40Q86WS4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
C12orf40Q86WS4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
C12orf40Q86WS4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
C12orf40Q86WS4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.2■■□□□ 1.14
C12orf40Q86WS4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.2■■□□□ 1.14
C12orf40Q86WS4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.2■■□□□ 1.14
C12orf40Q86WS4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
C12orf40Q86WS4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.2■■□□□ 1.14
C12orf40Q86WS4 LINC01960-201ENST00000563759 1884 ntBASIC22.2■■□□□ 1.14
C12orf40Q86WS4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 HLA-L-209ENST00000420110 1011 ntBASIC22.19■■□□□ 1.14
C12orf40Q86WS4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
C12orf40Q86WS4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms