Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 AL137784.2-201ENST00000607332 1000 ntBASIC18.84■□□□□ 0.61
SSX8Q7RTT4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
SSX8Q7RTT4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.83■□□□□ 0.61
SSX8Q7RTT4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX8Q7RTT4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SSX8Q7RTT4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX8Q7RTT4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.83■□□□□ 0.6
SSX8Q7RTT4 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.83■□□□□ 0.6
SSX8Q7RTT4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.83■□□□□ 0.6
SSX8Q7RTT4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX8Q7RTT4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 KRT19P1-201ENST00000405746 1186 ntBASIC18.82■□□□□ 0.6
SSX8Q7RTT4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX8Q7RTT4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 AC022517.1-201ENST00000592429 346 ntBASIC18.81■□□□□ 0.6
SSX8Q7RTT4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX8Q7RTT4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 AC079140.4-201ENST00000507448 529 ntBASIC18.8■□□□□ 0.6
SSX8Q7RTT4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSX8Q7RTT4 AC005224.4-201ENST00000583262 1652 ntBASIC18.79■□□□□ 0.6
SSX8Q7RTT4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 KRT18P11-201ENST00000435214 1283 ntBASIC18.79■□□□□ 0.6
SSX8Q7RTT4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 OR7E47P-201ENST00000546390 1422 ntBASIC18.79■□□□□ 0.6
SSX8Q7RTT4 AC093323.1-202ENST00000635031 2045 ntBASIC18.79■□□□□ 0.6
SSX8Q7RTT4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX8Q7RTT4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX8Q7RTT4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SSX8Q7RTT4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSX8Q7RTT4 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.78■□□□□ 0.6
SSX8Q7RTT4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SSX8Q7RTT4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.78■□□□□ 0.6
SSX8Q7RTT4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSX8Q7RTT4 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.78■□□□□ 0.6
SSX8Q7RTT4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSX8Q7RTT4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSX8Q7RTT4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSX8Q7RTT4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSX8Q7RTT4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.77■□□□□ 0.6
SSX8Q7RTT4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
SSX8Q7RTT4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms