Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS13CQ709C8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.34■□□□□ 0.53
VPS13CQ709C8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS13CQ709C8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS13CQ709C8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS13CQ709C8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.34■□□□□ 0.53
VPS13CQ709C8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS13CQ709C8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS13CQ709C8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VPS13CQ709C8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VPS13CQ709C8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS13CQ709C8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS13CQ709C8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS13CQ709C8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.53
VPS13CQ709C8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS13CQ709C8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
VPS13CQ709C8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.33■□□□□ 0.53
VPS13CQ709C8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.33■□□□□ 0.53
VPS13CQ709C8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.33■□□□□ 0.53
VPS13CQ709C8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
VPS13CQ709C8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS13CQ709C8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS13CQ709C8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS13CQ709C8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS13CQ709C8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS13CQ709C8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.33■□□□□ 0.52
VPS13CQ709C8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS13CQ709C8 GCSHP5-201ENST00000443090 522 ntBASIC18.33■□□□□ 0.52
VPS13CQ709C8 LINC01529-204ENST00000636474 1715 ntBASIC18.33■□□□□ 0.52
VPS13CQ709C8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS13CQ709C8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS13CQ709C8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS13CQ709C8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS13CQ709C8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS13CQ709C8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS13CQ709C8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS13CQ709C8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS13CQ709C8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
VPS13CQ709C8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VPS13CQ709C8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS13CQ709C8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VPS13CQ709C8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS13CQ709C8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13CQ709C8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13CQ709C8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13CQ709C8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13CQ709C8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 TSPY6P-201ENST00000448518 926 ntBASIC18.31■□□□□ 0.52
VPS13CQ709C8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13CQ709C8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13CQ709C8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS13CQ709C8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.31■□□□□ 0.52
VPS13CQ709C8 SLC7A5P1-201ENST00000568957 537 ntBASIC18.31■□□□□ 0.52
VPS13CQ709C8 AC005181.1-201ENST00000604782 1256 ntBASIC18.31■□□□□ 0.52
VPS13CQ709C8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.3■□□□□ 0.52
VPS13CQ709C8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.3■□□□□ 0.52
VPS13CQ709C8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS13CQ709C8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 AC104187.1-201ENST00000607510 612 ntBASIC18.3■□□□□ 0.52
VPS13CQ709C8 AL121832.2-201ENST00000610979 668 ntBASIC18.3■□□□□ 0.52
VPS13CQ709C8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS13CQ709C8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS13CQ709C8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS13CQ709C8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS13CQ709C8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS13CQ709C8 AC092118.2-201ENST00000613495 667 ntBASIC18.29■□□□□ 0.52
VPS13CQ709C8 ITM2C-210ENST00000620962 501 ntBASIC18.29■□□□□ 0.52
VPS13CQ709C8 AL161729.1-201ENST00000604104 1402 ntBASIC18.29■□□□□ 0.52
VPS13CQ709C8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS13CQ709C8 LINC00543-201ENST00000567234 1845 ntBASIC18.29■□□□□ 0.52
VPS13CQ709C8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS13CQ709C8 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS13CQ709C8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
VPS13CQ709C8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS13CQ709C8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS13CQ709C8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS13CQ709C8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS13CQ709C8 SLC29A4P1-201ENST00000398760 971 ntBASIC18.28■□□□□ 0.52
VPS13CQ709C8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.28■□□□□ 0.52
VPS13CQ709C8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.28■□□□□ 0.52
VPS13CQ709C8 AF201337.1-201ENST00000520239 748 ntBASIC18.28■□□□□ 0.52
VPS13CQ709C8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS13CQ709C8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS13CQ709C8 AC020928.2-201ENST00000588717 2197 ntBASIC18.28■□□□□ 0.52
VPS13CQ709C8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS13CQ709C8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
VPS13CQ709C8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS13CQ709C8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms