Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 DUSP8P3-201ENST00000399571 1760 ntBASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C9orf139Q6ZV77 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 AC137761.2-201ENST00000561729 223 ntBASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 AC145350.3-201ENST00000569033 163 ntBASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C9orf139Q6ZV77 AC092068.2-201ENST00000590491 1708 ntBASIC17.58■□□□□ 0.41
C9orf139Q6ZV77 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
C9orf139Q6ZV77 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
C9orf139Q6ZV77 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.58■□□□□ 0.41
C9orf139Q6ZV77 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C9orf139Q6ZV77 AC004854.2-201ENST00000608450 1441 ntBASIC17.58■□□□□ 0.41
C9orf139Q6ZV77 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 AC016769.1-201ENST00000409132 1010 ntBASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf139Q6ZV77 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf139Q6ZV77 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 ID1-201ENST00000376105 1233 ntBASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 AC080038.1-201ENST00000611274 1154 ntBASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf139Q6ZV77 AC009237.3-201ENST00000393279 1427 ntBASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 AC079140.4-201ENST00000507448 529 ntBASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf139Q6ZV77 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C9orf139Q6ZV77 ANOS2P-203ENST00000472227 1816 ntBASIC17.54■□□□□ 0.4
C9orf139Q6ZV77 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.54■□□□□ 0.4
C9orf139Q6ZV77 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.54■□□□□ 0.4
C9orf139Q6ZV77 KRT18P11-201ENST00000435214 1283 ntBASIC17.54■□□□□ 0.4
C9orf139Q6ZV77 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.54■□□□□ 0.4
C9orf139Q6ZV77 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms