Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNIP4Q6PIL6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP4Q6PIL6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNIP4Q6PIL6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNIP4Q6PIL6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KCNIP4Q6PIL6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNIP4Q6PIL6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KCNIP4Q6PIL6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.8■□□□□ 0.28
KCNIP4Q6PIL6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.79■□□□□ 0.28
KCNIP4Q6PIL6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 AC244015.2-201ENST00000616358 1861 ntBASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KCNIP4Q6PIL6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.77■□□□□ 0.28
KCNIP4Q6PIL6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP4Q6PIL6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
KCNIP4Q6PIL6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KCNIP4Q6PIL6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KCNIP4Q6PIL6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.77■□□□□ 0.28
KCNIP4Q6PIL6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms