Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
UBR4Q5T4S7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.17□□□□□ -0.46
UBR4Q5T4S7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 EEF1DP3-203ENST00000566025 782 ntBASIC12.16□□□□□ -0.46
UBR4Q5T4S7 AC233263.1-201ENST00000578059 224 ntBASIC12.16□□□□□ -0.46
UBR4Q5T4S7 AC008403.3-201ENST00000598924 454 ntBASIC12.16□□□□□ -0.46
UBR4Q5T4S7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 DUSP5P1-201ENST00000441325 1139 ntBASIC12.16□□□□□ -0.46
UBR4Q5T4S7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBR4Q5T4S7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 AC097658.1-201ENST00000475555 843 ntBASIC12.15□□□□□ -0.46
UBR4Q5T4S7 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 AC068338.2-201ENST00000563278 1430 ntBASIC12.15□□□□□ -0.46
UBR4Q5T4S7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC12.15□□□□□ -0.46
UBR4Q5T4S7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.15□□□□□ -0.47
UBR4Q5T4S7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
UBR4Q5T4S7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC12.15□□□□□ -0.47
UBR4Q5T4S7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 AC010536.3-201ENST00000620306 533 ntBASIC12.14□□□□□ -0.47
UBR4Q5T4S7 AC006557.6-201ENST00000623071 864 ntBASIC12.14□□□□□ -0.47
UBR4Q5T4S7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.14□□□□□ -0.47
UBR4Q5T4S7 MIR4785-201ENST00000585005 73 ntBASIC12.14□□□□□ -0.47
UBR4Q5T4S7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 AC012618.2-201ENST00000428058 849 ntBASIC12.13□□□□□ -0.47
UBR4Q5T4S7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 NTF6B-201ENST00000591913 560 ntBASIC12.13□□□□□ -0.47
UBR4Q5T4S7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 RPS2P55-201ENST00000397318 883 ntBASIC12.13□□□□□ -0.47
UBR4Q5T4S7 UPK3BP1-201ENST00000428678 509 ntBASIC12.13□□□□□ -0.47
UBR4Q5T4S7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 AC107956.1-201ENST00000494359 873 ntBASIC12.13□□□□□ -0.47
UBR4Q5T4S7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms