Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 C17orf82-201ENST00000623772 1530 ntBASIC20.86■□□□□ 0.93
PDCD4Q53EL6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.86■□□□□ 0.93
PDCD4Q53EL6 AC244015.2-201ENST00000616358 1861 ntBASIC20.86■□□□□ 0.93
PDCD4Q53EL6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.85■□□□□ 0.93
PDCD4Q53EL6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.85■□□□□ 0.93
PDCD4Q53EL6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDCD4Q53EL6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 MTDHP2-201ENST00000601468 714 ntBASIC20.83■□□□□ 0.93
PDCD4Q53EL6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDCD4Q53EL6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDCD4Q53EL6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDCD4Q53EL6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDCD4Q53EL6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDCD4Q53EL6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDCD4Q53EL6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 KRT125P-201ENST00000546827 989 ntBASIC20.81■□□□□ 0.92
PDCD4Q53EL6 Z92544.1-202ENST00000571933 1220 ntBASIC20.81■□□□□ 0.92
PDCD4Q53EL6 AL499627.2-201ENST00000606283 725 ntBASIC20.81■□□□□ 0.92
PDCD4Q53EL6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.81■□□□□ 0.92
PDCD4Q53EL6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms