Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 AC133637.1-201ENST00000624115 1537 ntBASIC14.34□□□□□ -0.11
SYCNQ0VAF6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SYCNQ0VAF6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SYCNQ0VAF6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.33□□□□□ -0.11
SYCNQ0VAF6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SYCNQ0VAF6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SYCNQ0VAF6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.33□□□□□ -0.12
SYCNQ0VAF6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 AC006455.2-201ENST00000429931 906 ntBASIC14.33□□□□□ -0.12
SYCNQ0VAF6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.33□□□□□ -0.12
SYCNQ0VAF6 AC080038.3-201ENST00000623346 1952 ntBASIC14.33□□□□□ -0.12
SYCNQ0VAF6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SYCNQ0VAF6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 AC139530.1-201ENST00000575312 1977 ntBASIC14.31□□□□□ -0.12
SYCNQ0VAF6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SYCNQ0VAF6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms