Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.73■□□□□ 0.91
RAE1P78406 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.73■□□□□ 0.91
RAE1P78406 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAE1P78406 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
RAE1P78406 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RAE1P78406 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAE1P78406 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAE1P78406 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAE1P78406 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RAE1P78406 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAE1P78406 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAE1P78406 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAE1P78406 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RAE1P78406 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.72■□□□□ 0.91
RAE1P78406 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.72■□□□□ 0.91
RAE1P78406 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAE1P78406 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.72■□□□□ 0.91
RAE1P78406 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.71■□□□□ 0.91
RAE1P78406 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RAE1P78406 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAE1P78406 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAE1P78406 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAE1P78406 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RAE1P78406 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.7■□□□□ 0.9
RAE1P78406 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 SYT6-210ENST00000641643 1587 ntBASIC20.7■□□□□ 0.9
RAE1P78406 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAE1P78406 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RAE1P78406 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.7■□□□□ 0.9
RAE1P78406 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAE1P78406 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RAE1P78406 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAE1P78406 FBXW4P1-201ENST00000426721 2239 ntBASIC20.69■□□□□ 0.9
RAE1P78406 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.69■□□□□ 0.9
RAE1P78406 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAE1P78406 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RAE1P78406 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.69■□□□□ 0.9
RAE1P78406 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.69■□□□□ 0.9
RAE1P78406 AC079089.2-201ENST00000531211 1277 ntBASIC20.69■□□□□ 0.9
RAE1P78406 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 AL138724.1-201ENST00000606771 1088 ntBASIC20.69■□□□□ 0.9
RAE1P78406 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.69■□□□□ 0.9
RAE1P78406 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.69■□□□□ 0.9
RAE1P78406 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RAE1P78406 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.69■□□□□ 0.9
RAE1P78406 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAE1P78406 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAE1P78406 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
RAE1P78406 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 AC010542.4-201ENST00000563151 1910 ntBASIC20.68■□□□□ 0.9
RAE1P78406 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAE1P78406 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.68■□□□□ 0.9
RAE1P78406 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.68■□□□□ 0.9
RAE1P78406 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAE1P78406 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.67■□□□□ 0.9
RAE1P78406 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAE1P78406 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAE1P78406 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAE1P78406 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAE1P78406 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAE1P78406 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.67■□□□□ 0.9
RAE1P78406 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.67■□□□□ 0.9
RAE1P78406 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.67■□□□□ 0.9
RAE1P78406 DUX4L19-201ENST00000557448 1267 ntBASIC20.67■□□□□ 0.9
RAE1P78406 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.67■□□□□ 0.9
RAE1P78406 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
RAE1P78406 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.67■□□□□ 0.9
RAE1P78406 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
RAE1P78406 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
RAE1P78406 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAE1P78406 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.66■□□□□ 0.9
RAE1P78406 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAE1P78406 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms