Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UBA52P62987 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBA52P62987 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.6■□□□□ 0.57
UBA52P62987 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.6■□□□□ 0.57
UBA52P62987 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBA52P62987 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.6■□□□□ 0.57
UBA52P62987 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBA52P62987 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBA52P62987 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UBA52P62987 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBA52P62987 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.59■□□□□ 0.57
UBA52P62987 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
UBA52P62987 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.59■□□□□ 0.57
UBA52P62987 EDA-201ENST00000338901 1233 ntBASIC18.59■□□□□ 0.57
UBA52P62987 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.59■□□□□ 0.57
UBA52P62987 SUDS3P1-201ENST00000505831 966 ntBASIC18.59■□□□□ 0.57
UBA52P62987 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBA52P62987 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBA52P62987 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBA52P62987 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBA52P62987 C11orf96-202ENST00000528572 1834 ntBASIC18.58■□□□□ 0.57
UBA52P62987 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
UBA52P62987 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBA52P62987 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBA52P62987 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
UBA52P62987 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.58■□□□□ 0.56
UBA52P62987 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBA52P62987 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.58■□□□□ 0.56
UBA52P62987 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.58■□□□□ 0.56
UBA52P62987 AC024257.2-201ENST00000549699 147 ntBASIC18.58■□□□□ 0.56
UBA52P62987 AC092666.2-201ENST00000613287 246 ntBASIC18.58■□□□□ 0.56
UBA52P62987 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
UBA52P62987 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.58■□□□□ 0.56
UBA52P62987 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.58■□□□□ 0.56
UBA52P62987 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
UBA52P62987 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.58■□□□□ 0.56
UBA52P62987 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBA52P62987 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBA52P62987 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.57■□□□□ 0.56
UBA52P62987 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UBA52P62987 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.57■□□□□ 0.56
UBA52P62987 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.57■□□□□ 0.56
UBA52P62987 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.57■□□□□ 0.56
UBA52P62987 AL355001.2-201ENST00000620617 1191 ntBASIC18.57■□□□□ 0.56
UBA52P62987 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.57■□□□□ 0.56
UBA52P62987 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
UBA52P62987 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.57■□□□□ 0.56
UBA52P62987 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBA52P62987 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.56■□□□□ 0.56
UBA52P62987 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UBA52P62987 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBA52P62987 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA52P62987 AC026271.2-201ENST00000428091 497 ntBASIC18.56■□□□□ 0.56
UBA52P62987 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.56■□□□□ 0.56
UBA52P62987 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA52P62987 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBA52P62987 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBA52P62987 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.56■□□□□ 0.56
UBA52P62987 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBA52P62987 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.56■□□□□ 0.56
UBA52P62987 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBA52P62987 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA52P62987 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
UBA52P62987 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBA52P62987 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA52P62987 FBXW4P1-201ENST00000426721 2239 ntBASIC18.55■□□□□ 0.56
UBA52P62987 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBA52P62987 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBA52P62987 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.55■□□□□ 0.56
UBA52P62987 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.55■□□□□ 0.56
UBA52P62987 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.54■□□□□ 0.56
UBA52P62987 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.54■□□□□ 0.56
UBA52P62987 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBA52P62987 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UBA52P62987 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms