Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM3P62310 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LSM3P62310 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.57■□□□□ 0.72
LSM3P62310 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LSM3P62310 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LSM3P62310 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM3P62310 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM3P62310 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM3P62310 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM3P62310 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
LSM3P62310 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM3P62310 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM3P62310 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
LSM3P62310 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.56■□□□□ 0.72
LSM3P62310 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM3P62310 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM3P62310 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM3P62310 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 AC026202.3-201ENST00000600805 1127 ntBASIC19.56■□□□□ 0.72
LSM3P62310 RAP2CP1-202ENST00000605179 643 ntBASIC19.56■□□□□ 0.72
LSM3P62310 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LSM3P62310 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM3P62310 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LSM3P62310 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 Z98882.1-201ENST00000622160 2253 ntBASIC19.55■□□□□ 0.72
LSM3P62310 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.55■□□□□ 0.72
LSM3P62310 ECEL1P2-201ENST00000461596 1295 ntBASIC19.55■□□□□ 0.72
LSM3P62310 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.55■□□□□ 0.72
LSM3P62310 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.55■□□□□ 0.72
LSM3P62310 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 FEM1AP4-201ENST00000443167 1987 ntBASIC19.55■□□□□ 0.72
LSM3P62310 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.55■□□□□ 0.72
LSM3P62310 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LSM3P62310 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM3P62310 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LSM3P62310 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
LSM3P62310 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM3P62310 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LSM3P62310 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.54■□□□□ 0.72
LSM3P62310 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LSM3P62310 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LSM3P62310 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM3P62310 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LSM3P62310 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LSM3P62310 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM3P62310 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM3P62310 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
LSM3P62310 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM3P62310 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSM3P62310 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LSM3P62310 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.52■□□□□ 0.72
LSM3P62310 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.52■□□□□ 0.72
LSM3P62310 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.52■□□□□ 0.72
LSM3P62310 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.52■□□□□ 0.72
LSM3P62310 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
LSM3P62310 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LSM3P62310 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM3P62310 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.52■□□□□ 0.71
LSM3P62310 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LSM3P62310 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LSM3P62310 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.51■□□□□ 0.71
LSM3P62310 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 AL592295.1-201ENST00000400984 884 ntBASIC19.51■□□□□ 0.71
LSM3P62310 ZNRF2P2-203ENST00000454624 420 ntBASIC19.51■□□□□ 0.71
LSM3P62310 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LSM3P62310 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM3P62310 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM3P62310 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms