Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.9■□□□□ 0.94
ERFP50548 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERFP50548 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.9■□□□□ 0.94
ERFP50548 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERFP50548 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.9■□□□□ 0.94
ERFP50548 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERFP50548 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERFP50548 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.9■□□□□ 0.94
ERFP50548 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.9■□□□□ 0.94
ERFP50548 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.89■□□□□ 0.94
ERFP50548 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERFP50548 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ERFP50548 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERFP50548 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
ERFP50548 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERFP50548 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.89■□□□□ 0.93
ERFP50548 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERFP50548 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERFP50548 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
ERFP50548 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERFP50548 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ERFP50548 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ERFP50548 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERFP50548 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERFP50548 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERFP50548 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ERFP50548 RARRES2P2-201ENST00000394842 485 ntBASIC20.88■□□□□ 0.93
ERFP50548 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERFP50548 AC133552.2-201ENST00000619106 1032 ntBASIC20.88■□□□□ 0.93
ERFP50548 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ERFP50548 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERFP50548 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERFP50548 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERFP50548 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ERFP50548 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.87■□□□□ 0.93
ERFP50548 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
ERFP50548 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ERFP50548 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERFP50548 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERFP50548 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ERFP50548 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERFP50548 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.87■□□□□ 0.93
ERFP50548 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.87■□□□□ 0.93
ERFP50548 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERFP50548 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERFP50548 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
ERFP50548 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERFP50548 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
ERFP50548 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ERFP50548 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERFP50548 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.86■□□□□ 0.93
ERFP50548 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.86■□□□□ 0.93
ERFP50548 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.86■□□□□ 0.93
ERFP50548 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERFP50548 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERFP50548 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
ERFP50548 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ERFP50548 SPCS2P3-201ENST00000500401 656 ntBASIC20.86■□□□□ 0.93
ERFP50548 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
ERFP50548 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERFP50548 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERFP50548 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERFP50548 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.86■□□□□ 0.93
ERFP50548 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.85■□□□□ 0.93
ERFP50548 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.85■□□□□ 0.93
ERFP50548 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.85■□□□□ 0.93
ERFP50548 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.85■□□□□ 0.93
ERFP50548 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.85■□□□□ 0.93
ERFP50548 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERFP50548 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ERFP50548 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.84■□□□□ 0.93
ERFP50548 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ERFP50548 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ERFP50548 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERFP50548 AC244015.2-201ENST00000616358 1861 ntBASIC20.84■□□□□ 0.93
ERFP50548 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.83■□□□□ 0.93
ERFP50548 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERFP50548 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.83■□□□□ 0.93
ERFP50548 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERFP50548 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ERFP50548 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ERFP50548 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms