Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC6A12P48065 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 AC079089.2-201ENST00000531211 1277 ntBASIC21.09■□□□□ 0.97
SLC6A12P48065 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC6A12P48065 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SLC6A12P48065 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A12P48065 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A12P48065 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A12P48065 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A12P48065 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SLC6A12P48065 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC6A12P48065 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A12P48065 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A12P48065 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A12P48065 AC008406.3-201ENST00000620001 1374 ntBASIC21.08■□□□□ 0.96
SLC6A12P48065 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A12P48065 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SLC6A12P48065 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A12P48065 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SLC6A12P48065 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SLC6A12P48065 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A12P48065 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A12P48065 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A12P48065 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A12P48065 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A12P48065 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A12P48065 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A12P48065 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A12P48065 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SLC6A12P48065 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC6A12P48065 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A12P48065 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A12P48065 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC6A12P48065 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC6A12P48065 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC6A12P48065 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC6A12P48065 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC6A12P48065 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SLC6A12P48065 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC6A12P48065 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC6A12P48065 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SLC6A12P48065 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 AC010141.3-201ENST00000456659 717 ntBASIC21.05■□□□□ 0.96
SLC6A12P48065 AC024257.2-201ENST00000549699 147 ntBASIC21.05■□□□□ 0.96
SLC6A12P48065 MIR4767-201ENST00000582827 78 ntBASIC21.05■□□□□ 0.96
SLC6A12P48065 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC6A12P48065 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC6A12P48065 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC6A12P48065 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SLC6A12P48065 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SLC6A12P48065 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SLC6A12P48065 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A12P48065 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SLC6A12P48065 AP005435.1-201ENST00000529293 1178 ntBASIC21.04■□□□□ 0.96
SLC6A12P48065 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A12P48065 AL136162.1-201ENST00000607711 1078 ntBASIC21.04■□□□□ 0.96
SLC6A12P48065 AC087239.1-201ENST00000622671 572 ntBASIC21.04■□□□□ 0.96
SLC6A12P48065 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A12P48065 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A12P48065 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A12P48065 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC6A12P48065 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A12P48065 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC6A12P48065 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SLC6A12P48065 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
SLC6A12P48065 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC6A12P48065 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SLC6A12P48065 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC6A12P48065 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC6A12P48065 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A12P48065 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC6A12P48065 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC6A12P48065 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A12P48065 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC6A12P48065 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC6A12P48065 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC6A12P48065 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC6A12P48065 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A12P48065 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
SLC6A12P48065 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC6A12P48065 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.02■□□□□ 0.96
SLC6A12P48065 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC6A12P48065 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC6A12P48065 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SLC6A12P48065 AC135279.3-201ENST00000610945 1311 ntBASIC21.02■□□□□ 0.95
SLC6A12P48065 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms