Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDNFP39905 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDNFP39905 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDNFP39905 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
GDNFP39905 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDNFP39905 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GDNFP39905 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.87■□□□□ 0.61
GDNFP39905 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GDNFP39905 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
GDNFP39905 AC092667.1-201ENST00000434301 2586 ntBASIC18.87■□□□□ 0.61
GDNFP39905 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.86■□□□□ 0.61
GDNFP39905 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDNFP39905 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.86■□□□□ 0.61
GDNFP39905 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GDNFP39905 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDNFP39905 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDNFP39905 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.86■□□□□ 0.61
GDNFP39905 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDNFP39905 AL451085.2-201ENST00000605085 799 ntBASIC18.86■□□□□ 0.61
GDNFP39905 AC137630.3-201ENST00000607245 391 ntBASIC18.86■□□□□ 0.61
GDNFP39905 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDNFP39905 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.86■□□□□ 0.61
GDNFP39905 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GDNFP39905 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GDNFP39905 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
GDNFP39905 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDNFP39905 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GDNFP39905 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
GDNFP39905 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.85■□□□□ 0.61
GDNFP39905 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GDNFP39905 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GDNFP39905 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.84■□□□□ 0.61
GDNFP39905 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GDNFP39905 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDNFP39905 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GDNFP39905 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.84■□□□□ 0.61
GDNFP39905 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GDNFP39905 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.84■□□□□ 0.61
GDNFP39905 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDNFP39905 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
GDNFP39905 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
GDNFP39905 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDNFP39905 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GDNFP39905 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
GDNFP39905 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDNFP39905 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDNFP39905 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDNFP39905 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GDNFP39905 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDNFP39905 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GDNFP39905 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GDNFP39905 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GDNFP39905 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GDNFP39905 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.83■□□□□ 0.6
GDNFP39905 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
GDNFP39905 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.83■□□□□ 0.6
GDNFP39905 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GDNFP39905 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GDNFP39905 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GDNFP39905 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDNFP39905 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDNFP39905 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.82■□□□□ 0.6
GDNFP39905 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.82■□□□□ 0.6
GDNFP39905 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.82■□□□□ 0.6
GDNFP39905 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.82■□□□□ 0.6
GDNFP39905 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GDNFP39905 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDNFP39905 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GDNFP39905 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.82■□□□□ 0.6
GDNFP39905 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.82■□□□□ 0.6
GDNFP39905 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDNFP39905 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
GDNFP39905 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.81■□□□□ 0.6
GDNFP39905 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.81■□□□□ 0.6
GDNFP39905 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GDNFP39905 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.81■□□□□ 0.6
GDNFP39905 AC009299.2-201ENST00000482477 511 ntBASIC18.81■□□□□ 0.6
GDNFP39905 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GDNFP39905 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GDNFP39905 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GDNFP39905 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDNFP39905 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
GDNFP39905 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.8■□□□□ 0.6
GDNFP39905 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
GDNFP39905 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
GDNFP39905 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.8■□□□□ 0.6
GDNFP39905 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms