Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.61■□□□□ 0.41
SAA4P35542 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SAA4P35542 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.6■□□□□ 0.41
SAA4P35542 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.6■□□□□ 0.41
SAA4P35542 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.6■□□□□ 0.41
SAA4P35542 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SAA4P35542 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SAA4P35542 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 BX005040.4-201ENST00000637145 1518 ntBASIC17.6■□□□□ 0.41
SAA4P35542 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SAA4P35542 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SAA4P35542 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SAA4P35542 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SAA4P35542 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.59■□□□□ 0.41
SAA4P35542 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.59■□□□□ 0.41
SAA4P35542 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.59■□□□□ 0.41
SAA4P35542 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.59■□□□□ 0.41
SAA4P35542 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 DUX4L2-201ENST00000561772 1275 ntBASIC17.59■□□□□ 0.41
SAA4P35542 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.59■□□□□ 0.41
SAA4P35542 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
SAA4P35542 DUX4L6-201ENST00000626483 1275 ntBASIC17.59■□□□□ 0.41
SAA4P35542 DUX4L1-201ENST00000627662 1275 ntBASIC17.59■□□□□ 0.41
SAA4P35542 DUX4L8-201ENST00000629013 1275 ntBASIC17.59■□□□□ 0.41
SAA4P35542 DUX4L3-201ENST00000630187 1275 ntBASIC17.59■□□□□ 0.41
SAA4P35542 DUX4L7-201ENST00000630678 1275 ntBASIC17.59■□□□□ 0.41
SAA4P35542 DUX4L5-201ENST00000630834 1275 ntBASIC17.59■□□□□ 0.41
SAA4P35542 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
SAA4P35542 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SAA4P35542 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.41
SAA4P35542 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SAA4P35542 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.58■□□□□ 0.4
SAA4P35542 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SAA4P35542 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SAA4P35542 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.58■□□□□ 0.4
SAA4P35542 AC104564.3-201ENST00000582367 638 ntBASIC17.58■□□□□ 0.4
SAA4P35542 TERF1P2-201ENST00000583350 1212 ntBASIC17.58■□□□□ 0.4
SAA4P35542 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.58■□□□□ 0.4
SAA4P35542 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SAA4P35542 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SAA4P35542 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SAA4P35542 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SAA4P35542 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SAA4P35542 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SAA4P35542 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SAA4P35542 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SAA4P35542 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.57■□□□□ 0.4
SAA4P35542 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SAA4P35542 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SAA4P35542 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SAA4P35542 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SAA4P35542 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SAA4P35542 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SAA4P35542 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.57■□□□□ 0.4
SAA4P35542 KRT18P14-201ENST00000534205 1250 ntBASIC17.57■□□□□ 0.4
SAA4P35542 TPRG1LP1-201ENST00000598702 760 ntBASIC17.57■□□□□ 0.4
SAA4P35542 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.57■□□□□ 0.4
SAA4P35542 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.57■□□□□ 0.4
SAA4P35542 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SAA4P35542 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SAA4P35542 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SAA4P35542 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 AC079089.2-201ENST00000531211 1277 ntBASIC17.56■□□□□ 0.4
SAA4P35542 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.56■□□□□ 0.4
SAA4P35542 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.56■□□□□ 0.4
SAA4P35542 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.56■□□□□ 0.4
SAA4P35542 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SAA4P35542 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.56■□□□□ 0.4
SAA4P35542 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.56■□□□□ 0.4
SAA4P35542 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.55■□□□□ 0.4
SAA4P35542 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA4P35542 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SAA4P35542 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA4P35542 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SAA4P35542 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SAA4P35542 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SAA4P35542 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.55■□□□□ 0.4
SAA4P35542 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms