Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.92■□□□□ 0.94
CCKBRP32239 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.92■□□□□ 0.94
CCKBRP32239 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCKBRP32239 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCKBRP32239 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCKBRP32239 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCKBRP32239 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCKBRP32239 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCKBRP32239 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCKBRP32239 KRT18P11-201ENST00000435214 1283 ntBASIC20.91■□□□□ 0.94
CCKBRP32239 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.91■□□□□ 0.94
CCKBRP32239 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.91■□□□□ 0.94
CCKBRP32239 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.91■□□□□ 0.94
CCKBRP32239 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.9■□□□□ 0.94
CCKBRP32239 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.9■□□□□ 0.94
CCKBRP32239 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.9■□□□□ 0.94
CCKBRP32239 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.9■□□□□ 0.94
CCKBRP32239 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.9■□□□□ 0.94
CCKBRP32239 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.9■□□□□ 0.94
CCKBRP32239 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCKBRP32239 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.9■□□□□ 0.94
CCKBRP32239 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.9■□□□□ 0.94
CCKBRP32239 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.9■□□□□ 0.94
CCKBRP32239 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.9■□□□□ 0.94
CCKBRP32239 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCKBRP32239 AC004812.2-201ENST00000611079 2094 ntBASIC20.9■□□□□ 0.94
CCKBRP32239 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCKBRP32239 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.89■□□□□ 0.94
CCKBRP32239 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCKBRP32239 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CCKBRP32239 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCKBRP32239 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCKBRP32239 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.89■□□□□ 0.93
CCKBRP32239 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.89■□□□□ 0.93
CCKBRP32239 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCKBRP32239 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCKBRP32239 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CCKBRP32239 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCKBRP32239 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCKBRP32239 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCKBRP32239 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCKBRP32239 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCKBRP32239 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.88■□□□□ 0.93
CCKBRP32239 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCKBRP32239 AC079140.4-201ENST00000507448 529 ntBASIC20.88■□□□□ 0.93
CCKBRP32239 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCKBRP32239 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.88■□□□□ 0.93
CCKBRP32239 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCKBRP32239 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCKBRP32239 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCKBRP32239 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCKBRP32239 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCKBRP32239 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCKBRP32239 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCKBRP32239 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.87■□□□□ 0.93
CCKBRP32239 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.87■□□□□ 0.93
CCKBRP32239 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.87■□□□□ 0.93
CCKBRP32239 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.87■□□□□ 0.93
CCKBRP32239 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCKBRP32239 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.86■□□□□ 0.93
CCKBRP32239 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCKBRP32239 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCKBRP32239 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCKBRP32239 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.86■□□□□ 0.93
CCKBRP32239 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.86■□□□□ 0.93
CCKBRP32239 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.86■□□□□ 0.93
CCKBRP32239 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCKBRP32239 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCKBRP32239 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.86■□□□□ 0.93
CCKBRP32239 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCKBRP32239 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCKBRP32239 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.85■□□□□ 0.93
CCKBRP32239 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCKBRP32239 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.85■□□□□ 0.93
CCKBRP32239 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCKBRP32239 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCKBRP32239 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.85■□□□□ 0.93
CCKBRP32239 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCKBRP32239 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCKBRP32239 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCKBRP32239 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCKBRP32239 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCKBRP32239 AC006970.2-201ENST00000450065 779 ntBASIC20.84■□□□□ 0.93
CCKBRP32239 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCKBRP32239 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCKBRP32239 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.84■□□□□ 0.93
CCKBRP32239 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.84■□□□□ 0.93
CCKBRP32239 ESRRAP2-201ENST00000418437 1549 ntBASIC20.83■□□□□ 0.93
CCKBRP32239 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCKBRP32239 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.83■□□□□ 0.93
CCKBRP32239 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.83■□□□□ 0.93
CCKBRP32239 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms