Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC27.34■■□□□ 1.97
PDE4AP27815 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PDE4AP27815 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PDE4AP27815 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDE4AP27815 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
PDE4AP27815 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.33■■□□□ 1.97
PDE4AP27815 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.33■■□□□ 1.97
PDE4AP27815 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDE4AP27815 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PDE4AP27815 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC27.33■■□□□ 1.97
PDE4AP27815 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
PDE4AP27815 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.96
PDE4AP27815 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC27.32■■□□□ 1.96
PDE4AP27815 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
PDE4AP27815 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE4AP27815 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
PDE4AP27815 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.32■■□□□ 1.96
PDE4AP27815 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE4AP27815 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDE4AP27815 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE4AP27815 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDE4AP27815 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC27.32■■□□□ 1.96
PDE4AP27815 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
PDE4AP27815 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PDE4AP27815 C17orf82-201ENST00000623772 1530 ntBASIC27.31■■□□□ 1.96
PDE4AP27815 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.31■■□□□ 1.96
PDE4AP27815 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.31■■□□□ 1.96
PDE4AP27815 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PDE4AP27815 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.31■■□□□ 1.96
PDE4AP27815 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PDE4AP27815 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
PDE4AP27815 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDE4AP27815 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PDE4AP27815 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PDE4AP27815 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.29■■□□□ 1.96
PDE4AP27815 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDE4AP27815 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC27.28■■□□□ 1.96
PDE4AP27815 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDE4AP27815 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PDE4AP27815 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.28■■□□□ 1.96
PDE4AP27815 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDE4AP27815 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
PDE4AP27815 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.28■■□□□ 1.96
PDE4AP27815 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
PDE4AP27815 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
PDE4AP27815 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC27.28■■□□□ 1.96
PDE4AP27815 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PDE4AP27815 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.27■■□□□ 1.96
PDE4AP27815 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.27■■□□□ 1.96
PDE4AP27815 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
PDE4AP27815 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE4AP27815 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PDE4AP27815 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PDE4AP27815 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.27■■□□□ 1.96
PDE4AP27815 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
PDE4AP27815 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE4AP27815 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE4AP27815 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE4AP27815 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PDE4AP27815 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
PDE4AP27815 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE4AP27815 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.26■■□□□ 1.95
PDE4AP27815 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
PDE4AP27815 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC27.26■■□□□ 1.95
PDE4AP27815 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PDE4AP27815 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE4AP27815 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDE4AP27815 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE4AP27815 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.25■■□□□ 1.95
PDE4AP27815 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDE4AP27815 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PDE4AP27815 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.25■■□□□ 1.95
PDE4AP27815 AC004687.1-201ENST00000579003 1625 ntBASIC27.25■■□□□ 1.95
PDE4AP27815 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.25■■□□□ 1.95
PDE4AP27815 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
PDE4AP27815 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC27.25■■□□□ 1.95
PDE4AP27815 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PDE4AP27815 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC27.25■■□□□ 1.95
PDE4AP27815 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE4AP27815 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
PDE4AP27815 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE4AP27815 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PDE4AP27815 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE4AP27815 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.24■■□□□ 1.95
PDE4AP27815 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
PDE4AP27815 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.24■■□□□ 1.95
PDE4AP27815 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.23■■□□□ 1.95
PDE4AP27815 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
PDE4AP27815 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE4AP27815 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
PDE4AP27815 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE4AP27815 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms