Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MSR1P21757 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MSR1P21757 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.2■□□□□ 0.66
MSR1P21757 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
MSR1P21757 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSR1P21757 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.2■□□□□ 0.66
MSR1P21757 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.2■□□□□ 0.66
MSR1P21757 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.2■□□□□ 0.66
MSR1P21757 AC068587.7-201ENST00000641602 218 ntBASIC19.2■□□□□ 0.66
MSR1P21757 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MSR1P21757 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.2■□□□□ 0.66
MSR1P21757 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MSR1P21757 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
MSR1P21757 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.19■□□□□ 0.66
MSR1P21757 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSR1P21757 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MSR1P21757 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSR1P21757 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSR1P21757 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MSR1P21757 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MSR1P21757 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.19■□□□□ 0.66
MSR1P21757 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.19■□□□□ 0.66
MSR1P21757 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSR1P21757 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.19■□□□□ 0.66
MSR1P21757 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSR1P21757 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MSR1P21757 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.19■□□□□ 0.66
MSR1P21757 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSR1P21757 AC008406.3-201ENST00000620001 1374 ntBASIC19.19■□□□□ 0.66
MSR1P21757 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
MSR1P21757 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MSR1P21757 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.18■□□□□ 0.66
MSR1P21757 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MSR1P21757 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.18■□□□□ 0.66
MSR1P21757 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.18■□□□□ 0.66
MSR1P21757 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSR1P21757 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
MSR1P21757 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.17■□□□□ 0.66
MSR1P21757 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
MSR1P21757 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.17■□□□□ 0.66
MSR1P21757 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.17■□□□□ 0.66
MSR1P21757 AC087239.1-201ENST00000622671 572 ntBASIC19.17■□□□□ 0.66
MSR1P21757 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MSR1P21757 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
MSR1P21757 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
MSR1P21757 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.17■□□□□ 0.66
MSR1P21757 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
MSR1P21757 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSR1P21757 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.16■□□□□ 0.66
MSR1P21757 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MSR1P21757 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.16■□□□□ 0.66
MSR1P21757 AC010525.1-201ENST00000585559 441 ntBASIC19.16■□□□□ 0.66
MSR1P21757 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.16■□□□□ 0.66
MSR1P21757 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.16■□□□□ 0.66
MSR1P21757 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MSR1P21757 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSR1P21757 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSR1P21757 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.15■□□□□ 0.66
MSR1P21757 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MSR1P21757 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSR1P21757 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MSR1P21757 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSR1P21757 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MSR1P21757 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSR1P21757 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.15■□□□□ 0.66
MSR1P21757 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms