Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB3BP20337 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB3BP20337 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB3BP20337 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.02■□□□□ 0.63
RAB3BP20337 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
RAB3BP20337 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3BP20337 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RAB3BP20337 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RAB3BP20337 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3BP20337 AC139795.1-202ENST00000500444 432 ntBASIC19.01■□□□□ 0.63
RAB3BP20337 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB3BP20337 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB3BP20337 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RAB3BP20337 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3BP20337 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB3BP20337 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB3BP20337 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3BP20337 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3BP20337 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB3BP20337 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19■□□□□ 0.63
RAB3BP20337 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19■□□□□ 0.63
RAB3BP20337 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19■□□□□ 0.63
RAB3BP20337 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RAB3BP20337 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19■□□□□ 0.63
RAB3BP20337 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19■□□□□ 0.63
RAB3BP20337 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19■□□□□ 0.63
RAB3BP20337 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19■□□□□ 0.63
RAB3BP20337 THA1P-201ENST00000590384 1145 ntBASIC19■□□□□ 0.63
RAB3BP20337 FP325331.1-202ENST00000623531 1380 ntBASIC19■□□□□ 0.63
RAB3BP20337 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAB3BP20337 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB3BP20337 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAB3BP20337 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RAB3BP20337 Z98882.1-201ENST00000622160 2253 ntBASIC18.99■□□□□ 0.63
RAB3BP20337 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB3BP20337 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 KRT18P24-201ENST00000344739 1156 ntBASIC18.99■□□□□ 0.63
RAB3BP20337 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.99■□□□□ 0.63
RAB3BP20337 AC009086.3-201ENST00000623486 1008 ntBASIC18.99■□□□□ 0.63
RAB3BP20337 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RAB3BP20337 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB3BP20337 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB3BP20337 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.98■□□□□ 0.63
RAB3BP20337 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.98■□□□□ 0.63
RAB3BP20337 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB3BP20337 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3BP20337 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB3BP20337 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3BP20337 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3BP20337 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3BP20337 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3BP20337 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3BP20337 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3BP20337 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3BP20337 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3BP20337 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.96■□□□□ 0.63
RAB3BP20337 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3BP20337 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
RAB3BP20337 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3BP20337 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3BP20337 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms