Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 AC005703.6-201ENST00000623265 1329 ntBASIC18.96■□□□□ 0.63
SRMP19623 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRMP19623 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SRMP19623 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.95■□□□□ 0.62
SRMP19623 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRMP19623 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.95■□□□□ 0.62
SRMP19623 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SRMP19623 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRMP19623 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SRMP19623 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRMP19623 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SRMP19623 AC010980.1-201ENST00000587192 1142 ntBASIC18.95■□□□□ 0.62
SRMP19623 NTF6A-201ENST00000591175 560 ntBASIC18.95■□□□□ 0.62
SRMP19623 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRMP19623 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.95■□□□□ 0.62
SRMP19623 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SRMP19623 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.95■□□□□ 0.62
SRMP19623 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRMP19623 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
SRMP19623 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 AC073130.3-201ENST00000624389 2278 ntBASIC18.94■□□□□ 0.62
SRMP19623 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SRMP19623 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.94■□□□□ 0.62
SRMP19623 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SRMP19623 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.94■□□□□ 0.62
SRMP19623 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.94■□□□□ 0.62
SRMP19623 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SRMP19623 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRMP19623 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.94■□□□□ 0.62
SRMP19623 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 Z98882.1-201ENST00000622160 2253 ntBASIC18.93■□□□□ 0.62
SRMP19623 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SRMP19623 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.93■□□□□ 0.62
SRMP19623 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SRMP19623 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.93■□□□□ 0.62
SRMP19623 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.93■□□□□ 0.62
SRMP19623 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRMP19623 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.92■□□□□ 0.62
SRMP19623 AC004687.1-201ENST00000579003 1625 ntBASIC18.92■□□□□ 0.62
SRMP19623 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SRMP19623 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRMP19623 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRMP19623 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.92■□□□□ 0.62
SRMP19623 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRMP19623 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRMP19623 AC004987.1-201ENST00000428627 508 ntBASIC18.92■□□□□ 0.62
SRMP19623 ATP5G2P3-201ENST00000429083 425 ntBASIC18.92■□□□□ 0.62
SRMP19623 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.92■□□□□ 0.62
SRMP19623 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SRMP19623 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRMP19623 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.92■□□□□ 0.62
SRMP19623 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRMP19623 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRMP19623 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRMP19623 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRMP19623 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.91■□□□□ 0.62
SRMP19623 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.91■□□□□ 0.62
SRMP19623 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRMP19623 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRMP19623 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRMP19623 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.91■□□□□ 0.62
SRMP19623 MIR4508-201ENST00000584178 70 ntBASIC18.91■□□□□ 0.62
SRMP19623 MIR6722-201ENST00000617286 78 ntBASIC18.91■□□□□ 0.62
SRMP19623 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRMP19623 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRMP19623 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SRMP19623 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SRMP19623 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.9■□□□□ 0.62
SRMP19623 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.9■□□□□ 0.62
SRMP19623 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.9■□□□□ 0.62
SRMP19623 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRMP19623 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SRMP19623 ABHD17AP5-201ENST00000580133 923 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms