Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.07■■□□□ 1.92
COL11A2P13942 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.07■■□□□ 1.92
COL11A2P13942 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL11A2P13942 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.07■■□□□ 1.92
COL11A2P13942 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.06■■□□□ 1.92
COL11A2P13942 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL11A2P13942 BRI3-207ENST00000539286 699 ntTSL 2 BASIC27.06■■□□□ 1.92
COL11A2P13942 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.06■■□□□ 1.92
COL11A2P13942 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL11A2P13942 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL11A2P13942 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.05■■□□□ 1.92
COL11A2P13942 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL11A2P13942 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL11A2P13942 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL11A2P13942 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.05■■□□□ 1.92
COL11A2P13942 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL11A2P13942 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
COL11A2P13942 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL11A2P13942 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.04■■□□□ 1.92
COL11A2P13942 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 CYP2T1P-201ENST00000432607 1285 ntBASIC27.04■■□□□ 1.92
COL11A2P13942 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.04■■□□□ 1.92
COL11A2P13942 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
COL11A2P13942 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL11A2P13942 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.03■■□□□ 1.92
COL11A2P13942 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL11A2P13942 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL11A2P13942 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.03■■□□□ 1.92
COL11A2P13942 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.03■■□□□ 1.92
COL11A2P13942 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL11A2P13942 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.03■■□□□ 1.92
COL11A2P13942 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
COL11A2P13942 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
COL11A2P13942 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL11A2P13942 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.02■■□□□ 1.92
COL11A2P13942 OXCT2P1-201ENST00000447263 1535 ntBASIC27.02■■□□□ 1.92
COL11A2P13942 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.02■■□□□ 1.92
COL11A2P13942 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL11A2P13942 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL11A2P13942 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL11A2P13942 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL11A2P13942 AC008687.6-201ENST00000596318 630 ntBASIC27.02■■□□□ 1.92
COL11A2P13942 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
COL11A2P13942 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL11A2P13942 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL11A2P13942 AF201337.1-201ENST00000520239 748 ntBASIC27.01■■□□□ 1.91
COL11A2P13942 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
COL11A2P13942 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.01■■□□□ 1.91
COL11A2P13942 AL353803.4-201ENST00000565882 1934 ntBASIC27■■□□□ 1.91
COL11A2P13942 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL11A2P13942 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL11A2P13942 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL11A2P13942 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27■■□□□ 1.91
COL11A2P13942 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL11A2P13942 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27■■□□□ 1.91
COL11A2P13942 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL11A2P13942 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
COL11A2P13942 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL11A2P13942 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL11A2P13942 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL11A2P13942 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.99■■□□□ 1.91
COL11A2P13942 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL11A2P13942 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL11A2P13942 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL11A2P13942 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.99■■□□□ 1.91
COL11A2P13942 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.99■■□□□ 1.91
COL11A2P13942 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL11A2P13942 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.99■■□□□ 1.91
COL11A2P13942 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL11A2P13942 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
COL11A2P13942 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.98■■□□□ 1.91
COL11A2P13942 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.98■■□□□ 1.91
COL11A2P13942 AC010141.2-201ENST00000452426 721 ntBASIC26.98■■□□□ 1.91
COL11A2P13942 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
COL11A2P13942 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.98■■□□□ 1.91
COL11A2P13942 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL11A2P13942 DUSP8P3-201ENST00000399571 1760 ntBASIC26.98■■□□□ 1.91
COL11A2P13942 DUSP8P5-201ENST00000422884 1815 ntBASIC26.98■■□□□ 1.91
COL11A2P13942 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
COL11A2P13942 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL11A2P13942 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
COL11A2P13942 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
COL11A2P13942 AC073210.2-201ENST00000430369 194 ntBASIC26.97■■□□□ 1.91
COL11A2P13942 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.97■■□□□ 1.91
COL11A2P13942 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.97■■□□□ 1.91
COL11A2P13942 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.97■■□□□ 1.91
COL11A2P13942 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.97■■□□□ 1.91
COL11A2P13942 AC009237.3-201ENST00000393279 1427 ntBASIC26.97■■□□□ 1.91
COL11A2P13942 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
COL11A2P13942 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL11A2P13942 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL11A2P13942 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
COL11A2P13942 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.96■■□□□ 1.91
COL11A2P13942 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms