Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
UBL4AP11441 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBL4AP11441 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.05■□□□□ 0.8
UBL4AP11441 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.05■□□□□ 0.8
UBL4AP11441 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBL4AP11441 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.05■□□□□ 0.8
UBL4AP11441 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBL4AP11441 AC242852.2-201ENST00000615738 1807 ntBASIC20.04■□□□□ 0.8
UBL4AP11441 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBL4AP11441 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBL4AP11441 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBL4AP11441 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.04■□□□□ 0.8
UBL4AP11441 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBL4AP11441 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBL4AP11441 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
UBL4AP11441 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBL4AP11441 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.03■□□□□ 0.8
UBL4AP11441 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UBL4AP11441 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
UBL4AP11441 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 UNC93B3-201ENST00000308076 687 ntBASIC20.03■□□□□ 0.8
UBL4AP11441 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.03■□□□□ 0.8
UBL4AP11441 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.03■□□□□ 0.8
UBL4AP11441 AL031602.1-201ENST00000633169 911 ntBASIC20.03■□□□□ 0.8
UBL4AP11441 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UBL4AP11441 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBL4AP11441 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UBL4AP11441 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
UBL4AP11441 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
UBL4AP11441 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBL4AP11441 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.02■□□□□ 0.8
UBL4AP11441 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.02■□□□□ 0.8
UBL4AP11441 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBL4AP11441 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.02■□□□□ 0.8
UBL4AP11441 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.02■□□□□ 0.8
UBL4AP11441 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.02■□□□□ 0.8
UBL4AP11441 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.02■□□□□ 0.8
UBL4AP11441 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.02■□□□□ 0.8
UBL4AP11441 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBL4AP11441 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBL4AP11441 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBL4AP11441 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBL4AP11441 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBL4AP11441 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.02■□□□□ 0.79
UBL4AP11441 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBL4AP11441 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBL4AP11441 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UBL4AP11441 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBL4AP11441 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBL4AP11441 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.01■□□□□ 0.79
UBL4AP11441 AL136162.1-201ENST00000607711 1078 ntBASIC20.01■□□□□ 0.79
UBL4AP11441 CA15P2-201ENST00000611168 834 ntBASIC20.01■□□□□ 0.79
UBL4AP11441 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
UBL4AP11441 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBL4AP11441 ECEL1P1-201ENST00000373592 1742 ntBASIC20.01■□□□□ 0.79
UBL4AP11441 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UBL4AP11441 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20■□□□□ 0.79
UBL4AP11441 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 AC010525.1-201ENST00000585559 441 ntBASIC20■□□□□ 0.79
UBL4AP11441 AC068587.7-201ENST00000641602 218 ntBASIC20■□□□□ 0.79
UBL4AP11441 AC080038.3-201ENST00000623346 1952 ntBASIC20■□□□□ 0.79
UBL4AP11441 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20■□□□□ 0.79
UBL4AP11441 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBL4AP11441 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
UBL4AP11441 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms