Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PF4V1P10720 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.16■□□□□ 0.34
PF4V1P10720 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.16■□□□□ 0.34
PF4V1P10720 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.16■□□□□ 0.34
PF4V1P10720 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PF4V1P10720 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PF4V1P10720 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PF4V1P10720 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PF4V1P10720 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.16■□□□□ 0.34
PF4V1P10720 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PF4V1P10720 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PF4V1P10720 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PF4V1P10720 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PF4V1P10720 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
PF4V1P10720 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.15■□□□□ 0.34
PF4V1P10720 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PF4V1P10720 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.15■□□□□ 0.34
PF4V1P10720 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.15■□□□□ 0.34
PF4V1P10720 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.15■□□□□ 0.34
PF4V1P10720 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.15■□□□□ 0.34
PF4V1P10720 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.15■□□□□ 0.34
PF4V1P10720 AL354811.1-201ENST00000610286 706 ntBASIC17.15■□□□□ 0.34
PF4V1P10720 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.15■□□□□ 0.34
PF4V1P10720 AC087239.1-201ENST00000622671 572 ntBASIC17.15■□□□□ 0.34
PF4V1P10720 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.15■□□□□ 0.34
PF4V1P10720 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PF4V1P10720 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PF4V1P10720 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PF4V1P10720 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PF4V1P10720 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.15■□□□□ 0.34
PF4V1P10720 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.34
PF4V1P10720 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
PF4V1P10720 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.14■□□□□ 0.33
PF4V1P10720 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PF4V1P10720 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.14■□□□□ 0.33
PF4V1P10720 MIR572-201ENST00000384983 95 ntBASIC17.14■□□□□ 0.33
PF4V1P10720 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 AC012414.1-201ENST00000556676 535 ntBASIC17.14■□□□□ 0.33
PF4V1P10720 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.14■□□□□ 0.33
PF4V1P10720 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.14■□□□□ 0.33
PF4V1P10720 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.14■□□□□ 0.33
PF4V1P10720 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PF4V1P10720 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PF4V1P10720 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PF4V1P10720 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PF4V1P10720 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.13■□□□□ 0.33
PF4V1P10720 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PF4V1P10720 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PF4V1P10720 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PF4V1P10720 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PF4V1P10720 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.13■□□□□ 0.33
PF4V1P10720 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.13■□□□□ 0.33
PF4V1P10720 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PF4V1P10720 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PF4V1P10720 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PF4V1P10720 MIR6084-201ENST00000622012 110 ntBASIC17.13■□□□□ 0.33
PF4V1P10720 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PF4V1P10720 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 AC027612.3-201ENST00000413684 1047 ntBASIC17.12■□□□□ 0.33
PF4V1P10720 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.12■□□□□ 0.33
PF4V1P10720 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.12■□□□□ 0.33
PF4V1P10720 AL137784.2-201ENST00000607332 1000 ntBASIC17.12■□□□□ 0.33
PF4V1P10720 AC068587.7-201ENST00000641602 218 ntBASIC17.12■□□□□ 0.33
PF4V1P10720 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.12■□□□□ 0.33
PF4V1P10720 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PF4V1P10720 LINC01960-201ENST00000563759 1884 ntBASIC17.12■□□□□ 0.33
PF4V1P10720 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PF4V1P10720 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PF4V1P10720 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.11■□□□□ 0.33
PF4V1P10720 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.11■□□□□ 0.33
PF4V1P10720 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PF4V1P10720 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PF4V1P10720 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms