Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM18P0DKX4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.92■□□□□ 0.78
SMIM18P0DKX4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 KRT18P10-201ENST00000388836 1287 ntBASIC19.91■□□□□ 0.78
SMIM18P0DKX4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM18P0DKX4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMIM18P0DKX4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM18P0DKX4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMIM18P0DKX4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM18P0DKX4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM18P0DKX4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
SMIM18P0DKX4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 SMPD5-203ENST00000639008 1464 ntBASIC19.88■□□□□ 0.77
SMIM18P0DKX4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.88■□□□□ 0.77
SMIM18P0DKX4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM18P0DKX4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM18P0DKX4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms