Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RETP07949 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RETP07949 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETP07949 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.98■■□□□ 1.11
RETP07949 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.98■■□□□ 1.11
RETP07949 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETP07949 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETP07949 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RETP07949 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETP07949 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.97■■□□□ 1.11
RETP07949 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.97■■□□□ 1.11
RETP07949 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.97■■□□□ 1.11
RETP07949 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.97■■□□□ 1.11
RETP07949 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETP07949 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RETP07949 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.96■■□□□ 1.11
RETP07949 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETP07949 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETP07949 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETP07949 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.96■■□□□ 1.11
RETP07949 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.96■■□□□ 1.11
RETP07949 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RETP07949 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.96■■□□□ 1.11
RETP07949 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RETP07949 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RETP07949 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RETP07949 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.95■■□□□ 1.1
RETP07949 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RETP07949 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RETP07949 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RETP07949 FAM201B-201ENST00000458407 597 ntBASIC21.95■■□□□ 1.1
RETP07949 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.95■■□□□ 1.1
RETP07949 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.95■■□□□ 1.1
RETP07949 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
RETP07949 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.95■■□□□ 1.1
RETP07949 BX005040.4-201ENST00000637145 1518 ntBASIC21.95■■□□□ 1.1
RETP07949 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RETP07949 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RETP07949 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
RETP07949 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 TSPY6P-201ENST00000448518 926 ntBASIC21.94■■□□□ 1.1
RETP07949 AC083906.2-201ENST00000511578 360 ntBASIC21.94■■□□□ 1.1
RETP07949 AC093827.2-201ENST00000512654 315 ntBASIC21.94■■□□□ 1.1
RETP07949 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
RETP07949 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RETP07949 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETP07949 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RETP07949 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RETP07949 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETP07949 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETP07949 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.93■■□□□ 1.1
RETP07949 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RETP07949 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETP07949 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.93■■□□□ 1.1
RETP07949 ABCB10P4-201ENST00000566803 2184 ntBASIC21.93■■□□□ 1.1
RETP07949 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RETP07949 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.92■■□□□ 1.1
RETP07949 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.92■■□□□ 1.1
RETP07949 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.92■■□□□ 1.1
RETP07949 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETP07949 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETP07949 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETP07949 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETP07949 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.92■■□□□ 1.1
RETP07949 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.92■■□□□ 1.1
RETP07949 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.92■■□□□ 1.1
RETP07949 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.92■■□□□ 1.1
RETP07949 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RETP07949 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RETP07949 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETP07949 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RETP07949 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.91■■□□□ 1.1
RETP07949 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.91■■□□□ 1.1
RETP07949 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.91■■□□□ 1.1
RETP07949 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETP07949 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RETP07949 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETP07949 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RETP07949 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RETP07949 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.9■■□□□ 1.1
RETP07949 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETP07949 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETP07949 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RETP07949 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETP07949 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms