Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.34■□□□□ 0.69
CDRT1O95170 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDRT1O95170 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CDRT1O95170 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.34■□□□□ 0.69
CDRT1O95170 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDRT1O95170 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDRT1O95170 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDRT1O95170 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.33■□□□□ 0.69
CDRT1O95170 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDRT1O95170 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDRT1O95170 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDRT1O95170 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
CDRT1O95170 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDRT1O95170 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDRT1O95170 AC120024.1-201ENST00000562672 995 ntBASIC19.33■□□□□ 0.68
CDRT1O95170 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.33■□□□□ 0.68
CDRT1O95170 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDRT1O95170 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.33■□□□□ 0.68
CDRT1O95170 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
CDRT1O95170 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDRT1O95170 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDRT1O95170 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDRT1O95170 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDRT1O95170 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDRT1O95170 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
CDRT1O95170 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CDRT1O95170 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDRT1O95170 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDRT1O95170 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.32■□□□□ 0.68
CDRT1O95170 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDRT1O95170 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDRT1O95170 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDRT1O95170 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDRT1O95170 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDRT1O95170 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDRT1O95170 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDRT1O95170 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDRT1O95170 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDRT1O95170 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.31■□□□□ 0.68
CDRT1O95170 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.31■□□□□ 0.68
CDRT1O95170 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.31■□□□□ 0.68
CDRT1O95170 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.31■□□□□ 0.68
CDRT1O95170 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDRT1O95170 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.31■□□□□ 0.68
CDRT1O95170 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.31■□□□□ 0.68
CDRT1O95170 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDRT1O95170 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDRT1O95170 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDRT1O95170 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDRT1O95170 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDRT1O95170 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.3■□□□□ 0.68
CDRT1O95170 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.3■□□□□ 0.68
CDRT1O95170 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDRT1O95170 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDRT1O95170 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDRT1O95170 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDRT1O95170 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDRT1O95170 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDRT1O95170 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDRT1O95170 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDRT1O95170 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.29■□□□□ 0.68
CDRT1O95170 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.29■□□□□ 0.68
CDRT1O95170 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.29■□□□□ 0.68
CDRT1O95170 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDRT1O95170 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDRT1O95170 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDRT1O95170 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.29■□□□□ 0.68
CDRT1O95170 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDRT1O95170 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDRT1O95170 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.28■□□□□ 0.68
CDRT1O95170 LINC01521-201ENST00000504184 1943 ntBASIC19.28■□□□□ 0.68
CDRT1O95170 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.28■□□□□ 0.68
CDRT1O95170 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 AC004987.1-201ENST00000428627 508 ntBASIC19.28■□□□□ 0.68
CDRT1O95170 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.28■□□□□ 0.68
CDRT1O95170 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDRT1O95170 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDRT1O95170 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDRT1O95170 AF131216.4-201ENST00000638924 1588 ntBASIC19.27■□□□□ 0.68
CDRT1O95170 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDRT1O95170 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDRT1O95170 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDRT1O95170 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms