Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PFDN1O60925 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.54■□□□□ 0.72
PFDN1O60925 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN1O60925 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN1O60925 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PFDN1O60925 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PFDN1O60925 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN1O60925 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.53■□□□□ 0.72
PFDN1O60925 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN1O60925 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.53■□□□□ 0.72
PFDN1O60925 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN1O60925 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN1O60925 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.52■□□□□ 0.72
PFDN1O60925 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
PFDN1O60925 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN1O60925 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.52■□□□□ 0.72
PFDN1O60925 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN1O60925 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN1O60925 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.52■□□□□ 0.72
PFDN1O60925 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PFDN1O60925 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PFDN1O60925 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
PFDN1O60925 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PFDN1O60925 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PFDN1O60925 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PFDN1O60925 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PFDN1O60925 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.51■□□□□ 0.71
PFDN1O60925 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN1O60925 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PFDN1O60925 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN1O60925 AC010542.4-201ENST00000563151 1910 ntBASIC19.51■□□□□ 0.71
PFDN1O60925 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PFDN1O60925 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.51■□□□□ 0.71
PFDN1O60925 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.51■□□□□ 0.71
PFDN1O60925 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PFDN1O60925 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PFDN1O60925 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN1O60925 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN1O60925 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PFDN1O60925 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN1O60925 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN1O60925 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.5■□□□□ 0.71
PFDN1O60925 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PFDN1O60925 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.5■□□□□ 0.71
PFDN1O60925 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN1O60925 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN1O60925 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN1O60925 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN1O60925 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.5■□□□□ 0.71
PFDN1O60925 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN1O60925 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN1O60925 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 HCG11-201ENST00000411553 5696 ntBASIC19.49■□□□□ 0.71
PFDN1O60925 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
PFDN1O60925 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.49■□□□□ 0.71
PFDN1O60925 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PFDN1O60925 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.49■□□□□ 0.71
PFDN1O60925 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.49■□□□□ 0.71
PFDN1O60925 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PFDN1O60925 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PFDN1O60925 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.49■□□□□ 0.71
PFDN1O60925 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PFDN1O60925 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PFDN1O60925 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.48■□□□□ 0.71
PFDN1O60925 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PFDN1O60925 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PFDN1O60925 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PFDN1O60925 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PFDN1O60925 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PFDN1O60925 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PFDN1O60925 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.47■□□□□ 0.71
PFDN1O60925 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PFDN1O60925 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.47■□□□□ 0.71
PFDN1O60925 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PFDN1O60925 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PFDN1O60925 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PFDN1O60925 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN1O60925 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PFDN1O60925 AC018445.3-201ENST00000624177 1945 ntBASIC19.46■□□□□ 0.71
PFDN1O60925 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PFDN1O60925 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.46■□□□□ 0.71
PFDN1O60925 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms