Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
GRIN3BO60391 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.95■■□□□ 1.91
GRIN3BO60391 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.95■■□□□ 1.9
GRIN3BO60391 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
GRIN3BO60391 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.95■■□□□ 1.9
GRIN3BO60391 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
GRIN3BO60391 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
GRIN3BO60391 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
GRIN3BO60391 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
GRIN3BO60391 AC005224.4-201ENST00000583262 1652 ntBASIC26.93■■□□□ 1.9
GRIN3BO60391 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
GRIN3BO60391 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
GRIN3BO60391 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.93■■□□□ 1.9
GRIN3BO60391 AL512625.2-201ENST00000417533 625 ntBASIC26.93■■□□□ 1.9
GRIN3BO60391 CYP2T1P-201ENST00000432607 1285 ntBASIC26.93■■□□□ 1.9
GRIN3BO60391 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.93■■□□□ 1.9
GRIN3BO60391 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.93■■□□□ 1.9
GRIN3BO60391 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.93■■□□□ 1.9
GRIN3BO60391 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
GRIN3BO60391 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
GRIN3BO60391 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
GRIN3BO60391 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
GRIN3BO60391 AC068338.2-201ENST00000563278 1430 ntBASIC26.92■■□□□ 1.9
GRIN3BO60391 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.92■■□□□ 1.9
GRIN3BO60391 AC144652.1-201ENST00000609974 1624 ntBASIC26.92■■□□□ 1.9
GRIN3BO60391 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
GRIN3BO60391 AC026366.1-201ENST00000488803 879 ntBASIC26.92■■□□□ 1.9
GRIN3BO60391 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
GRIN3BO60391 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
GRIN3BO60391 AC073648.6-201ENST00000641589 218 ntBASIC26.92■■□□□ 1.9
GRIN3BO60391 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
GRIN3BO60391 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.91■■□□□ 1.9
GRIN3BO60391 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.91■■□□□ 1.9
GRIN3BO60391 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GRIN3BO60391 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GRIN3BO60391 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GRIN3BO60391 KRT18P21-201ENST00000515767 1272 ntBASIC26.91■■□□□ 1.9
GRIN3BO60391 UNC93B5-201ENST00000530315 699 ntBASIC26.91■■□□□ 1.9
GRIN3BO60391 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
GRIN3BO60391 KRT18P20-201ENST00000548986 1279 ntBASIC26.91■■□□□ 1.9
GRIN3BO60391 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
GRIN3BO60391 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
GRIN3BO60391 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
GRIN3BO60391 AL121749.1-202ENST00000609313 2153 ntBASIC26.91■■□□□ 1.9
GRIN3BO60391 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.9■■□□□ 1.9
GRIN3BO60391 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
GRIN3BO60391 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GRIN3BO60391 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GRIN3BO60391 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
GRIN3BO60391 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.9■■□□□ 1.9
GRIN3BO60391 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.9■■□□□ 1.9
GRIN3BO60391 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.9■■□□□ 1.9
GRIN3BO60391 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
GRIN3BO60391 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.9■■□□□ 1.9
GRIN3BO60391 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
GRIN3BO60391 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.89■■□□□ 1.9
GRIN3BO60391 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
GRIN3BO60391 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
GRIN3BO60391 BX276092.2-201ENST00000417668 665 ntBASIC26.89■■□□□ 1.9
GRIN3BO60391 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
GRIN3BO60391 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.89■■□□□ 1.9
GRIN3BO60391 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
GRIN3BO60391 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
GRIN3BO60391 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.89■■□□□ 1.9
GRIN3BO60391 AC008694.1-202ENST00000636953 945 ntBASIC26.89■■□□□ 1.9
GRIN3BO60391 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
GRIN3BO60391 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
GRIN3BO60391 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.88■■□□□ 1.89
GRIN3BO60391 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
GRIN3BO60391 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.88■■□□□ 1.89
GRIN3BO60391 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.88■■□□□ 1.89
GRIN3BO60391 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
GRIN3BO60391 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.88■■□□□ 1.89
GRIN3BO60391 AC009237.3-201ENST00000393279 1427 ntBASIC26.88■■□□□ 1.89
GRIN3BO60391 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
GRIN3BO60391 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
GRIN3BO60391 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
GRIN3BO60391 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
GRIN3BO60391 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.87■■□□□ 1.89
GRIN3BO60391 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
GRIN3BO60391 TERF1P5-201ENST00000477545 1207 ntBASIC26.87■■□□□ 1.89
GRIN3BO60391 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
GRIN3BO60391 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
GRIN3BO60391 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
GRIN3BO60391 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
GRIN3BO60391 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
GRIN3BO60391 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.86■■□□□ 1.89
GRIN3BO60391 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.86■■□□□ 1.89
GRIN3BO60391 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
GRIN3BO60391 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
GRIN3BO60391 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.86■■□□□ 1.89
GRIN3BO60391 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
GRIN3BO60391 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
GRIN3BO60391 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.85■■□□□ 1.89
GRIN3BO60391 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.85■■□□□ 1.89
GRIN3BO60391 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
GRIN3BO60391 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
GRIN3BO60391 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
GRIN3BO60391 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
GRIN3BO60391 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms