Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDH17O14917 AC104564.3-201ENST00000582367 638 ntBASIC20.73■□□□□ 0.91
PCDH17O14917 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDH17O14917 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH17O14917 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDH17O14917 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDH17O14917 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDH17O14917 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PCDH17O14917 AC068587.7-201ENST00000641602 218 ntBASIC20.72■□□□□ 0.91
PCDH17O14917 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH17O14917 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PCDH17O14917 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH17O14917 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDH17O14917 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDH17O14917 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH17O14917 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH17O14917 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH17O14917 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH17O14917 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH17O14917 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDH17O14917 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH17O14917 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDH17O14917 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH17O14917 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH17O14917 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH17O14917 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH17O14917 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDH17O14917 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH17O14917 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDH17O14917 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH17O14917 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.91
PCDH17O14917 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH17O14917 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDH17O14917 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH17O14917 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDH17O14917 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH17O14917 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH17O14917 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH17O14917 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDH17O14917 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDH17O14917 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH17O14917 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PCDH17O14917 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH17O14917 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 AC079630.1-202ENST00000618127 1840 ntBASIC20.69■□□□□ 0.9
PCDH17O14917 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH17O14917 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCDH17O14917 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH17O14917 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH17O14917 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH17O14917 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH17O14917 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDH17O14917 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH17O14917 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH17O14917 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH17O14917 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH17O14917 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH17O14917 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.68■□□□□ 0.9
PCDH17O14917 MIR6821-201ENST00000617625 74 ntBASIC20.68■□□□□ 0.9
PCDH17O14917 AL358852.1-201ENST00000623174 1268 ntBASIC20.68■□□□□ 0.9
PCDH17O14917 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH17O14917 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH17O14917 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDH17O14917 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH17O14917 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
PCDH17O14917 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH17O14917 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH17O14917 TSPY26P-201ENST00000476365 1326 ntBASIC20.67■□□□□ 0.9
PCDH17O14917 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH17O14917 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH17O14917 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PCDH17O14917 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH17O14917 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH17O14917 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms