Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.77■□□□□ 0.92
RTCAO00442 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTCAO00442 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RTCAO00442 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.76■□□□□ 0.91
RTCAO00442 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTCAO00442 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 LINC00526-201ENST00000581067 1875 ntBASIC20.76■□□□□ 0.91
RTCAO00442 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.76■□□□□ 0.91
RTCAO00442 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.76■□□□□ 0.91
RTCAO00442 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.76■□□□□ 0.91
RTCAO00442 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.76■□□□□ 0.91
RTCAO00442 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTCAO00442 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RTCAO00442 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTCAO00442 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 AC079834.2-201ENST00000609776 1949 ntBASIC20.75■□□□□ 0.91
RTCAO00442 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.75■□□□□ 0.91
RTCAO00442 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.75■□□□□ 0.91
RTCAO00442 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.75■□□□□ 0.91
RTCAO00442 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RTCAO00442 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTCAO00442 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.74■□□□□ 0.91
RTCAO00442 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCAO00442 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RTCAO00442 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCAO00442 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.74■□□□□ 0.91
RTCAO00442 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RTCAO00442 AC106739.1-201ENST00000617035 715 ntBASIC20.74■□□□□ 0.91
RTCAO00442 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCAO00442 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.74■□□□□ 0.91
RTCAO00442 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTCAO00442 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCAO00442 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
RTCAO00442 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTCAO00442 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RTCAO00442 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.73■□□□□ 0.91
RTCAO00442 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.73■□□□□ 0.91
RTCAO00442 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.73■□□□□ 0.91
RTCAO00442 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTCAO00442 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCAO00442 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RTCAO00442 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTCAO00442 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTCAO00442 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
RTCAO00442 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCAO00442 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCAO00442 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTCAO00442 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCAO00442 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCAO00442 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.71■□□□□ 0.91
RTCAO00442 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.71■□□□□ 0.91
RTCAO00442 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTCAO00442 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCAO00442 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.71■□□□□ 0.91
RTCAO00442 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RTCAO00442 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RTCAO00442 BX842568.3-201ENST00000418104 571 ntBASIC20.71■□□□□ 0.91
RTCAO00442 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.71■□□□□ 0.91
RTCAO00442 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCAO00442 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.71■□□□□ 0.91
RTCAO00442 AC008764.7-201ENST00000593779 1081 ntBASIC20.71■□□□□ 0.91
RTCAO00442 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.71■□□□□ 0.91
RTCAO00442 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTCAO00442 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.71■□□□□ 0.91
RTCAO00442 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTCAO00442 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTCAO00442 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
RTCAO00442 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCAO00442 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTCAO00442 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.7■□□□□ 0.9
RTCAO00442 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
RTCAO00442 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.7■□□□□ 0.9
RTCAO00442 AL139246.5-201ENST00000606645 996 ntBASIC20.7■□□□□ 0.9
RTCAO00442 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.7■□□□□ 0.9
RTCAO00442 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms