Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC7O00311 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CDC7O00311 AL031602.1-201ENST00000633169 911 ntBASIC21.39■■□□□ 1.01
CDC7O00311 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC7O00311 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC7O00311 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC7O00311 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC7O00311 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDC7O00311 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC7O00311 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC7O00311 AC092171.4-201ENST00000609130 632 ntBASIC21.38■■□□□ 1.01
CDC7O00311 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC7O00311 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC7O00311 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC7O00311 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC7O00311 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC7O00311 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC7O00311 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CDC7O00311 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC7O00311 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDC7O00311 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.37■■□□□ 1.01
CDC7O00311 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC7O00311 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC7O00311 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDC7O00311 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC7O00311 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDC7O00311 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.36■■□□□ 1.01
CDC7O00311 SERBP1P1-201ENST00000396021 1160 ntBASIC21.36■■□□□ 1.01
CDC7O00311 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC7O00311 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC7O00311 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.36■■□□□ 1.01
CDC7O00311 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC7O00311 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CDC7O00311 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC7O00311 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC7O00311 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC7O00311 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.36■■□□□ 1.01
CDC7O00311 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC7O00311 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC7O00311 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC7O00311 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC7O00311 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC7O00311 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC7O00311 AC010525.1-201ENST00000585559 441 ntBASIC21.35■■□□□ 1.01
CDC7O00311 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDC7O00311 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC7O00311 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.35■■□□□ 1.01
CDC7O00311 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC7O00311 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC7O00311 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC7O00311 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.34■■□□□ 1.01
CDC7O00311 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.34■■□□□ 1.01
CDC7O00311 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDC7O00311 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC7O00311 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.34■■□□□ 1.01
CDC7O00311 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
CDC7O00311 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CDC7O00311 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDC7O00311 SYT6-210ENST00000641643 1587 ntBASIC21.34■■□□□ 1.01
CDC7O00311 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDC7O00311 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDC7O00311 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDC7O00311 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC7O00311 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDC7O00311 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CDC7O00311 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDC7O00311 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
CDC7O00311 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC7O00311 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CDC7O00311 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CDC7O00311 OR2I1P-207ENST00000453522 948 ntBASIC21.33■■□□□ 1.01
CDC7O00311 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDC7O00311 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.33■■□□□ 1.01
CDC7O00311 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC7O00311 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.33■■□□□ 1.01
CDC7O00311 FBXW4P1-201ENST00000426721 2239 ntBASIC21.33■■□□□ 1
CDC7O00311 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC7O00311 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDC7O00311 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CDC7O00311 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CDC7O00311 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC7O00311 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDC7O00311 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.32■■□□□ 1
CDC7O00311 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC7O00311 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDC7O00311 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDC7O00311 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.31■■□□□ 1
CDC7O00311 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDC7O00311 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.31■■□□□ 1
CDC7O00311 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.31■■□□□ 1
CDC7O00311 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
CDC7O00311 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms