Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.6■■□□□ 1.05
TLR4O00206 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TLR4O00206 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.6■■□□□ 1.05
TLR4O00206 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TLR4O00206 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR4O00206 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR4O00206 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR4O00206 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TLR4O00206 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.59■■□□□ 1.05
TLR4O00206 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.59■■□□□ 1.05
TLR4O00206 AC080038.1-201ENST00000611274 1154 ntBASIC21.59■■□□□ 1.05
TLR4O00206 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.59■■□□□ 1.05
TLR4O00206 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.58■■□□□ 1.05
TLR4O00206 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR4O00206 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR4O00206 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.58■■□□□ 1.05
TLR4O00206 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TLR4O00206 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR4O00206 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR4O00206 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TLR4O00206 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TLR4O00206 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
TLR4O00206 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TLR4O00206 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TLR4O00206 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TLR4O00206 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.58■■□□□ 1.05
TLR4O00206 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TLR4O00206 OXCT2P1-201ENST00000447263 1535 ntBASIC21.58■■□□□ 1.04
TLR4O00206 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TLR4O00206 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TLR4O00206 AC004854.2-201ENST00000608450 1441 ntBASIC21.57■■□□□ 1.04
TLR4O00206 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.57■■□□□ 1.04
TLR4O00206 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TLR4O00206 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TLR4O00206 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.57■■□□□ 1.04
TLR4O00206 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.57■■□□□ 1.04
TLR4O00206 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TLR4O00206 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TLR4O00206 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.57■■□□□ 1.04
TLR4O00206 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.57■■□□□ 1.04
TLR4O00206 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR4O00206 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR4O00206 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR4O00206 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.56■■□□□ 1.04
TLR4O00206 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR4O00206 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.56■■□□□ 1.04
TLR4O00206 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR4O00206 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TLR4O00206 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.56■■□□□ 1.04
TLR4O00206 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.56■■□□□ 1.04
TLR4O00206 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TLR4O00206 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.56■■□□□ 1.04
TLR4O00206 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.56■■□□□ 1.04
TLR4O00206 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.56■■□□□ 1.04
TLR4O00206 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TLR4O00206 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.56■■□□□ 1.04
TLR4O00206 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TLR4O00206 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR4O00206 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR4O00206 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TLR4O00206 AC012676.1-201ENST00000574705 1949 ntBASIC21.55■■□□□ 1.04
TLR4O00206 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR4O00206 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR4O00206 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TLR4O00206 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.55■■□□□ 1.04
TLR4O00206 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.55■■□□□ 1.04
TLR4O00206 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR4O00206 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR4O00206 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TLR4O00206 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.55■■□□□ 1.04
TLR4O00206 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TLR4O00206 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.55■■□□□ 1.04
TLR4O00206 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR4O00206 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR4O00206 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.54■■□□□ 1.04
TLR4O00206 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.54■■□□□ 1.04
TLR4O00206 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.54■■□□□ 1.04
TLR4O00206 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TLR4O00206 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.54■■□□□ 1.04
TLR4O00206 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR4O00206 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TLR4O00206 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TLR4O00206 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TLR4O00206 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.53■■□□□ 1.04
TLR4O00206 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TLR4O00206 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.53■■□□□ 1.04
TLR4O00206 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TLR4O00206 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
TLR4O00206 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR4O00206 KRT19P1-201ENST00000405746 1186 ntBASIC21.53■■□□□ 1.04
TLR4O00206 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.53■■□□□ 1.04
TLR4O00206 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.53■■□□□ 1.04
TLR4O00206 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.53■■□□□ 1.04
TLR4O00206 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TLR4O00206 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR4O00206 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.53■■□□□ 1.04
TLR4O00206 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TLR4O00206 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TLR4O00206 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TLR4O00206 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms