Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM4A7MD48 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM4A7MD48 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM4A7MD48 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SRRM4A7MD48 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SRRM4A7MD48 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM4A7MD48 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM4A7MD48 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM4A7MD48 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM4A7MD48 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRRM4A7MD48 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 MIR4466-201ENST00000606121 54 ntBASIC17.52■□□□□ 0.4
SRRM4A7MD48 AL031602.1-201ENST00000633169 911 ntBASIC17.52■□□□□ 0.4
SRRM4A7MD48 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.52■□□□□ 0.4
SRRM4A7MD48 FBXW4P1-201ENST00000426721 2239 ntBASIC17.52■□□□□ 0.39
SRRM4A7MD48 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRRM4A7MD48 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.52■□□□□ 0.39
SRRM4A7MD48 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SRRM4A7MD48 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.51■□□□□ 0.39
SRRM4A7MD48 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SRRM4A7MD48 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.51■□□□□ 0.39
SRRM4A7MD48 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRRM4A7MD48 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SRRM4A7MD48 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.5■□□□□ 0.39
SRRM4A7MD48 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRRM4A7MD48 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 AC007375.3-201ENST00000600936 2314 ntBASIC17.49■□□□□ 0.39
SRRM4A7MD48 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SRRM4A7MD48 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.49■□□□□ 0.39
SRRM4A7MD48 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.49■□□□□ 0.39
SRRM4A7MD48 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.49■□□□□ 0.39
SRRM4A7MD48 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.49■□□□□ 0.39
SRRM4A7MD48 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SRRM4A7MD48 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRRM4A7MD48 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRRM4A7MD48 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRRM4A7MD48 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRRM4A7MD48 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 AC092171.4-201ENST00000609130 632 ntBASIC17.48■□□□□ 0.39
SRRM4A7MD48 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRRM4A7MD48 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRRM4A7MD48 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRRM4A7MD48 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.48■□□□□ 0.39
SRRM4A7MD48 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.47■□□□□ 0.39
SRRM4A7MD48 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms