Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01546A6NGU7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 GABARAPL3-202ENST00000624044 1851 ntBASIC15.42■□□□□ 0.06
LINC01546A6NGU7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 FP325331.1-202ENST00000623531 1380 ntBASIC15.42■□□□□ 0.06
LINC01546A6NGU7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 AC004448.1-201ENST00000458332 883 ntBASIC15.42■□□□□ 0.06
LINC01546A6NGU7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 AC016575.1-201ENST00000607026 382 ntBASIC15.42■□□□□ 0.06
LINC01546A6NGU7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 LINC01529-204ENST00000636474 1715 ntBASIC15.42■□□□□ 0.06
LINC01546A6NGU7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01546A6NGU7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 AC022413.1-201ENST00000624602 984 ntBASIC15.41■□□□□ 0.06
LINC01546A6NGU7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01546A6NGU7 AC009831.1-201ENST00000580420 1582 ntBASIC15.41■□□□□ 0.06
LINC01546A6NGU7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 LONRF2P2-201ENST00000439212 571 ntBASIC15.4■□□□□ 0.06
LINC01546A6NGU7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01546A6NGU7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 AC018755.3-202ENST00000596210 929 ntBASIC15.39■□□□□ 0.05
LINC01546A6NGU7 AC009086.3-201ENST00000623486 1008 ntBASIC15.39■□□□□ 0.05
LINC01546A6NGU7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01546A6NGU7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms