Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.74■■□□□ 1.71
SSC5DA1L4H1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.74■■□□□ 1.71
SSC5DA1L4H1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SSC5DA1L4H1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SSC5DA1L4H1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SSC5DA1L4H1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.74■■□□□ 1.71
SSC5DA1L4H1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.73■■□□□ 1.71
SSC5DA1L4H1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 DUSP8P3-201ENST00000399571 1760 ntBASIC25.72■■□□□ 1.71
SSC5DA1L4H1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 AC007322.1-201ENST00000426983 750 ntBASIC25.72■■□□□ 1.71
SSC5DA1L4H1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SSC5DA1L4H1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SSC5DA1L4H1 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.71■■□□□ 1.71
SSC5DA1L4H1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.71■■□□□ 1.71
SSC5DA1L4H1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SSC5DA1L4H1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SSC5DA1L4H1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SSC5DA1L4H1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.7■■□□□ 1.71
SSC5DA1L4H1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
SSC5DA1L4H1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.7■■□□□ 1.71
SSC5DA1L4H1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSC5DA1L4H1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.7■■□□□ 1.7
SSC5DA1L4H1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SSC5DA1L4H1 AC004812.2-201ENST00000611079 2094 ntBASIC25.7■■□□□ 1.7
SSC5DA1L4H1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SSC5DA1L4H1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SSC5DA1L4H1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SSC5DA1L4H1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.7■■□□□ 1.7
SSC5DA1L4H1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SSC5DA1L4H1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SSC5DA1L4H1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SSC5DA1L4H1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SSC5DA1L4H1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SSC5DA1L4H1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SSC5DA1L4H1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSC5DA1L4H1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SSC5DA1L4H1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
SSC5DA1L4H1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.67■■□□□ 1.7
SSC5DA1L4H1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SSC5DA1L4H1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
SSC5DA1L4H1 AC009237.3-201ENST00000393279 1427 ntBASIC25.66■■□□□ 1.7
SSC5DA1L4H1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
SSC5DA1L4H1 SLC29A4P1-201ENST00000398760 971 ntBASIC25.65■■□□□ 1.7
SSC5DA1L4H1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 DUSP8P5-201ENST00000422884 1815 ntBASIC25.65■■□□□ 1.7
SSC5DA1L4H1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 AP001160.3-201ENST00000601484 763 ntBASIC25.65■■□□□ 1.7
SSC5DA1L4H1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SSC5DA1L4H1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.64■■□□□ 1.7
SSC5DA1L4H1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
SSC5DA1L4H1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms