Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRAV12-1A0A0B4J245 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 LINC01006-201ENST00000333319 2292 ntBASIC15.26■□□□□ 0.03
TRAV12-1A0A0B4J245 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 AF106564.1-201ENST00000607058 2553 ntBASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV12-1A0A0B4J245 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV12-1A0A0B4J245 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV12-1A0A0B4J245 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 AC007029.1-201ENST00000604183 313 ntBASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 CR559946.2-201ENST00000623684 991 ntBASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 LINC01960-201ENST00000563759 1884 ntBASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms