Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV13-2A0A0B4J235 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 AC093536.1-201ENST00000569153 554 ntBASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV13-2A0A0B4J235 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV13-2A0A0B4J235 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRAV13-2A0A0B4J235 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV13-2A0A0B4J235 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
TRAV13-2A0A0B4J235 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV13-2A0A0B4J235 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-2A0A0B4J235 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-2A0A0B4J235 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV13-2A0A0B4J235 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV13-2A0A0B4J235 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV13-2A0A0B4J235 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 AL592295.1-201ENST00000400984 884 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms