Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC005229.4-201ENST00000610085 2198 ntBASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC009102.2-201ENST00000606772 1639 ntBASIC18.2■□□□□ 0.5
TRBV6-7A0A0A0MS04 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC010542.4-201ENST00000563151 1910 ntBASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV6-7A0A0A0MS04 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-7A0A0A0MS04 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 KRT125P-201ENST00000546827 989 ntBASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 Z92544.1-202ENST00000571933 1220 ntBASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-7A0A0A0MS04 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV6-7A0A0A0MS04 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 MTDHP2-201ENST00000601468 714 ntBASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 AC004687.1-201ENST00000579003 1625 ntBASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRBV6-7A0A0A0MS04 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.14■□□□□ 0.5
TRBV6-7A0A0A0MS04 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TRBV6-7A0A0A0MS04 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.14■□□□□ 0.5
TRBV6-7A0A0A0MS04 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 CA15P2-201ENST00000611168 834 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms