Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV19A0A075B6N1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV19A0A075B6N1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV19A0A075B6N1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV19A0A075B6N1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV19A0A075B6N1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV19A0A075B6N1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV19A0A075B6N1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV19A0A075B6N1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV19A0A075B6N1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV19A0A075B6N1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV19A0A075B6N1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRBV19A0A075B6N1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 AC092028.1-203ENST00000608262 953 ntBASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV19A0A075B6N1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 C17orf82-201ENST00000623772 1530 ntBASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV19A0A075B6N1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV19A0A075B6N1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 AC005229.4-201ENST00000610085 2198 ntBASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 KRT125P-201ENST00000546827 989 ntBASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 MTDHP2-201ENST00000601468 714 ntBASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV19A0A075B6N1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms