Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
SH2D2AQ9NP31 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC027369.3-201ENST00000530465 3707 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 TFAM-201ENST00000373895 973 ntTSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 RNF7-202ENST00000393000 805 ntTSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 LINC00339-201ENST00000404210 1189 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC074085.2-201ENST00000416734 428 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 ACTG1P10-201ENST00000428275 1082 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 SLC25A15P1-201ENST00000456738 342 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 JPT1-205ENST00000470924 663 ntTSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 JPT1-208ENST00000481647 576 ntTSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC104117.4-201ENST00000521486 847 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC023078.7-201ENST00000532712 961 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC233702.8-201ENST00000579239 965 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 BOLA3P2-201ENST00000586496 323 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 LINC00339-213ENST00000642137 222 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 TEF-202ENST00000406644 4386 ntTSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 WASH2P-201ENST00000453662 1684 ntBASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 CSF2RA-208ENST00000417535 1955 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SH2D2AQ9NP31 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 AC007906.2-202ENST00000619363 1687 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 OR2A9P-202ENST00000479102 1990 ntBASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 AC010240.1-201ENST00000429606 459 ntBASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SH2D2AQ9NP31 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms