Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 AL078590.2-201ENST00000417483 1360 ntTSL 3 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LMO3Q8TAP4 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 DGCR11-201ENST00000609958 2214 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AC080112.4-201ENST00000623156 2491 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AL356277.1-201ENST00000401875 267 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 PTPA-219ENST00000435305 530 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AC073465.1-201ENST00000456671 464 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AC012100.1-201ENST00000470304 282 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 JPT1-208ENST00000481647 576 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 CTBP2P6-201ENST00000526402 1229 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AP000911.1-205ENST00000527712 594 ntTSL 4 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 ATP6V1D-210ENST00000555474 1102 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 FBXO36P1-201ENST00000579006 471 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 LINC01667-201ENST00000623554 1137 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 NTM-221ENST00000539799 2550 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 SLC22A8-205ENST00000535878 1387 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LMO3Q8TAP4 AC005696.4-201ENST00000614400 3147 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 FYN-203ENST00000368667 2416 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 AC134407.3-201ENST00000624035 2139 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CDC20P1-201ENST00000488829 1500 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 RN7SKP90-201ENST00000363013 335 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 MIR1227-201ENST00000408484 88 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 RN7SKP212-201ENST00000410851 328 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 MAPT-208ENST00000431008 1233 ntTSL 5 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 RN7SL638P-201ENST00000494527 290 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 MIR5001-201ENST00000580185 100 ntBASIC13.3□□□□□ -0.28
LMO3Q8TAP4 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 ZNF667-AS1-203ENST00000586822 468 ntTSL 2 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 AC084018.1-201ENST00000609067 572 ntTSL 4 BASIC13.3□□□□□ -0.28
LMO3Q8TAP4 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms