Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD3-BMI1R4GMX3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD3-BMI1R4GMX3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD3-BMI1R4GMX3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
COMMD3-BMI1R4GMX3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COMMD3-BMI1R4GMX3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COMMD3-BMI1R4GMX3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 AL161729.1-201ENST00000604104 1402 ntBASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COMMD3-BMI1R4GMX3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COMMD3-BMI1R4GMX3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.36■□□□□ 0.85
COMMD3-BMI1R4GMX3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COMMD3-BMI1R4GMX3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
COMMD3-BMI1R4GMX3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 NTF6A-201ENST00000591175 560 ntBASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 AC011551.1-201ENST00000614101 683 ntBASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
COMMD3-BMI1R4GMX3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COMMD3-BMI1R4GMX3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COMMD3-BMI1R4GMX3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COMMD3-BMI1R4GMX3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COMMD3-BMI1R4GMX3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COMMD3-BMI1R4GMX3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COMMD3-BMI1R4GMX3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms