Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 HLA-L-211ENST00000482052 1765 ntBASIC15.04■□□□□ -0
SPCS1Q9Y6A9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 MIR6089-201ENST00000616698 64 ntBASIC15.04■□□□□ -0
SPCS1Q9Y6A9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
SPCS1Q9Y6A9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS1Q9Y6A9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPCS1Q9Y6A9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS1Q9Y6A9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 AL158211.5-201ENST00000623583 2518 ntBASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SPCS1Q9Y6A9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15□□□□□ -0.01
SPCS1Q9Y6A9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPCS1Q9Y6A9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPCS1Q9Y6A9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.99□□□□□ -0.01
SPCS1Q9Y6A9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPCS1Q9Y6A9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SPCS1Q9Y6A9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SPCS1Q9Y6A9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms