Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 AC007375.3-201ENST00000600936 2314 ntBASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 AC092053.2-201ENST00000640557 1818 ntBASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGB3Q9Y5G1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 AC110285.6-201ENST00000617652 491 ntBASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGB3Q9Y5G1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 AC241377.3-202ENST00000626088 1088 ntBASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 AC241585.3-202ENST00000628937 1088 ntBASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 AC245100.8-202ENST00000629247 1058 ntBASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGB3Q9Y5G1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 C11orf96-202ENST00000528572 1834 ntBASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 AC096631.2-201ENST00000436136 790 ntBASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGB3Q9Y5G1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 SRD5A1P1-201ENST00000442297 786 ntBASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGB3Q9Y5G1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB3Q9Y5G1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB3Q9Y5G1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms