Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB7Q9Y5E2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB7Q9Y5E2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB7Q9Y5E2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB7Q9Y5E2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB7Q9Y5E2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
PCDHB7Q9Y5E2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 KRT18P11-201ENST00000435214 1283 ntBASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB7Q9Y5E2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 ESRRAP2-201ENST00000418437 1549 ntBASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHB7Q9Y5E2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB7Q9Y5E2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 DUSP8P3-201ENST00000399571 1760 ntBASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDHB7Q9Y5E2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 AC011767.1-201ENST00000617410 1153 ntBASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHB7Q9Y5E2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 AC006970.2-201ENST00000450065 779 ntBASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHB7Q9Y5E2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms