Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL157384.1-201ENST00000445995 2473 ntBASIC20.6■□□□□ 0.89
AP4S1Q9Y587 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.59■□□□□ 0.89
AP4S1Q9Y587 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4S1Q9Y587 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
AP4S1Q9Y587 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP4S1Q9Y587 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP4S1Q9Y587 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP4S1Q9Y587 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
AP4S1Q9Y587 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
AP4S1Q9Y587 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP4S1Q9Y587 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP4S1Q9Y587 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
AP4S1Q9Y587 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP4S1Q9Y587 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 LINC01521-201ENST00000504184 1943 ntBASIC20.57■□□□□ 0.88
AP4S1Q9Y587 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP4S1Q9Y587 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 MIR6765-201ENST00000614092 87 ntBASIC20.56■□□□□ 0.88
AP4S1Q9Y587 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP4S1Q9Y587 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 LINC01960-201ENST00000563759 1884 ntBASIC20.55■□□□□ 0.88
AP4S1Q9Y587 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
AP4S1Q9Y587 Z98882.1-201ENST00000622160 2253 ntBASIC20.55■□□□□ 0.88
AP4S1Q9Y587 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 MIR639-201ENST00000384974 98 ntBASIC20.54■□□□□ 0.88
AP4S1Q9Y587 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP4S1Q9Y587 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 AF106564.1-201ENST00000607058 2553 ntBASIC20.53■□□□□ 0.88
AP4S1Q9Y587 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.53■□□□□ 0.88
AP4S1Q9Y587 FEM1AP4-201ENST00000443167 1987 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms